Pre_GI: BLASTP Hits

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Query: NC_013716:3708415:3710456 Citrobacter rodentium ICC168, complete genome

Start: 3710456, End: 3710707, Length: 252

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:398012:403340403340403591252Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-1890.1
NC_020063:4170464:417584641758464176097252Enterobacteriaceae bacterium strain FGI 57, complete genomeacyl carrier protein6e-1682.8
NC_020064:3790472:381037738103773810625249Serratia marcescens FGI94, complete genomephosphopantetheine-containing protein2e-1271.2
NC_016612:178864:193139193139193390252Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein6e-1166.2