Pre_GI: BLASTP Hits

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Query: NC_013716:357928:376306 Citrobacter rodentium ICC168, complete genome

Start: 376306, End: 377118, Length: 813

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015224:3820338:382807738280773828856780Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,AatB3e-118424
CU928159:30700:378893788938710822Escherichia coli str. 55989 plasmid 55989p, complete genomeAatB2e-48192
NC_009786:43331:628916289163664774Escherichia coli E24377A plasmid pETEC_80, complete sequencehypothetical protein3e-26119