Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:357928:375174 Citrobacter rodentium ICC168, complete genome

Start: 375174, End: 376382, Length: 1209

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015224:3820338:3828813382881338300211209Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,AatA outermembrane protein0678
CU928159:30700:3860738607398451239Escherichia coli str. 55989 plasmid 55989p, complete genomeAatA outermembrane protein4e-48192
NC_009786:43331:6176861768629341167Escherichia coli E24377A plasmid pETEC_80, complete sequencehypothetical protein9e-25114