Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:3512950:3546229 Citrobacter rodentium ICC168, complete genome

Start: 3546229, End: 3546720, Length: 492

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020181:3328844:334181633418163342310495Enterobacter aerogenes EA1509E, complete genomeIntegrase regulator R2e-87320
NC_015379:2417312:245856224585622459077516Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein6e-23106
NC_004129:5373886:539104953910495391594546Pseudomonas fluorescens Pf-5, complete genomehypothetical protein7e-23106
NC_012660:2143376:214603221460322146550519Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein6e-22103
NC_010170:1324758:135839213583921358922531Bordetella petrii, complete genomeprobable transcriptional regulator3e-21100
NC_007005:1705406:171339117133911713975585Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein1e-2098.6
NC_012731:600518:623336623336623779444Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-2098.2
NC_010170:1498253:150116815011681501695528Bordetella petrii, complete genomehypothetical protein3e-2097.8
NC_008344:49039:115498115498116025528Nitrosomonas eutropha C91, complete genomehypothetical protein5e-2096.7
NC_010170:1103224:110322411032241103751528Bordetella petrii, complete genomehypothetical protein2e-1995.1
NC_013421:1780722:179926017992601799820561Pectobacterium wasabiae WPP163, complete genomehypothetical protein3e-1994.4
NC_008752:585884:608097608097608651555Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein4e-1993.6
NC_018080:5091772:511224351122435112791549Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-1891.7
NC_007086:2477040:247984624798462480379534Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-1891.3
NC_009656:4527457:459202645920264592574549Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-1891.3
NC_012691:2614603:262872326287232629253531Tolumonas auensis DSM 9187, complete genomehypothetical protein3e-1891.3
NC_010688:2781624:280540028054002805933534Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-1789.4
NC_009138:1974935:198985319898531990380528Herminiimonas arsenicoxydans, complete genomehypothetical protein2e-1685.1
NC_008463:5246954:526575652657565266289534Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-1685.1
NC_009512:3282500:330783133078313308325495Pseudomonas putida F1, complete genomehypothetical protein3e-1684.3
NC_010519:1963256:198710219871021987587486Haemophilus somnus 2336 chromosome, complete genomehypothetical protein4e-1684
NC_015733:2658337:265783726578372658340504Pseudomonas putida S16 chromosome, complete genomehypothetical protein6e-1683.2
NC_002488:1638946:169737816973781697911534Xylella fastidiosa 9a5c, complete genomehypothetical protein5e-1477
NC_012913:1041969:104807010480701048555486Aggregatibacter aphrophilus NJ8700, complete genomehypothetical protein5e-1167
NC_016830:3869572:393509139350913935414324Pseudomonas fluorescens F113 chromosome, complete genomeintegrase regulator R6e-1063.5