Pre_GI: BLASTP Hits

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Query: NC_013716:3327881:3364276 Citrobacter rodentium ICC168, complete genome

Start: 3364276, End: 3364929, Length: 654

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010505:5525461:552937355293735530050678Methylobacterium radiotolerans JCM 2831, complete genomehypothetical protein3e-45181
NC_018750:6192970:621028362102836211023741Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein2e-23108
NC_014151:449732:463617463617464294678Cellulomonas flavigena DSM 20109 chromosome, complete genomehypothetical protein9e-23106
NC_014815:4385759:440972244097224410318597Micromonospora sp. L5 chromosome, complete genomehypothetical protein2e-1789.4