Pre_GI: BLASTP Hits

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Query: NC_013716:3327881:3331770 Citrobacter rodentium ICC168, complete genome

Start: 3331770, End: 3332645, Length: 876

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:1518113:152805715280571528947891Pseudomonas putida F1, complete genome6-phosphogluconate dehydrogenase, NAD-binding1e-70266
NC_014817:29795:340473404734937891Asticcacaulis excentricus CB 48 chromosome 2, complete sequencephosphogluconate dehydrogenase, nad-binding, putative-like protein1e-39163
NC_014206:2971304:298078029807802981682903Geobacillus sp. C56-T3 chromosome, complete genomephosphogluconate dehydrogenase8e-27120
NC_011892:352652:356227356227357129903Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completePhosphogluconate dehydrogenase, NAD-binding, putative-like protein2e-26119
NC_014974:1076565:108673310867331087527795Thermus scotoductus SA-01 chromosome, complete genome6-phosphogluconate dehydrogenase, NAD-binding protein2e-1893.2
NC_015563:2702787:272062327206232721474852Delftia sp. Cs1-4 chromosome, complete genome6-phosphogluconate dehydrogenase NAD-binding protein3e-1272.4
NC_015953:3456535:347913634791363479978843Streptomyces sp. SirexAA-E chromosome, complete genomephosphogluconate dehydrogenase, NAD-binding -like protein7e-1271.2