Pre_GI: BLASTP Hits

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Query: NC_013716:2898434:2914927 Citrobacter rodentium ICC168, complete genome

Start: 2914927, End: 2915430, Length: 504

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013282:1256769:128958312895831290065483Cronobacter turicensis, complete genomehypothetical protein5e-30130
NC_012721:182965:182450182450182968519Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein8e-28122
NC_010625:670482:670482670482671033552Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetype VI secretion system lysozyme-related protein3e-25114
NC_007511:1780500:180216118021611802709549Burkholderia sp. 383 chromosome 2, complete sequenceprotein of unknown function DUF13162e-1788.6
NC_014306:679888:696988696988697569582Erwinia billingiae Eb661, complete genomeType VI secretion system, lysozyme-related family protein1e-1685.9
NC_008835:1827905:182841518284151828975561Burkholderia mallei NCTC 10229 chromosome I, complete sequencehypothetical protein2e-1685.1
NC_015663:4129685:414972541497254150288564Enterobacter aerogenes KCTC 2190 chromosome, complete genometype VI secretion system protein ImpF4e-1684
NC_020064:2921809:293991529399152940493579Serratia marcescens FGI94, complete genomehypothetical protein3e-1581.3
NC_016816:1823127:184046818404681841043576Pantoea ananatis LMG 5342, complete genometype VI secretion system lysozyme-like protein4e-1580.5
NC_016514:2713834:277395927739592774540582Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein6e-1580.1