Pre_GI: BLASTP Hits

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Query: NC_013716:2898434:2910115 Citrobacter rodentium ICC168, complete genome

Start: 2910115, End: 2910441, Length: 327

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014618:3482053:348846034884603488786327Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein6e-38155
NC_015138:2069739:209868520986852099011327Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein4e-2096.7
NC_015376:345347:349948349948350274327Burkholderia gladioli BSR3 chromosome chromosome 2, completehypothetical protein4e-1476.6
NC_012880:1613485:162066916206691620923255Dickeya dadantii Ech703, complete genomehypothetical protein2e-0857.8