Pre_GI: BLASTP Hits

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Query: NC_013716:2898434:2909577 Citrobacter rodentium ICC168, complete genome

Start: 2909577, End: 2910110, Length: 534

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014618:3482053:348877934887793489336558Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein6e-63239
NC_015138:2069739:209812520981252098673549Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein4e-43174