Pre_GI: BLASTP Hits

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Query: NC_013716:2898434:2905440 Citrobacter rodentium ICC168, complete genome

Start: 2905440, End: 2905688, Length: 249

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011004:3582078:358942235894223589670249Rhodopseudomonas palustris TIE-1, complete genomehypothetical protein3e-26117
NC_014960:2638562:264259526425952642894300Anaerolinea thermophila UNI-1, complete genomehypothetical protein1e-1065.1
NC_014960:2371989:238701523870152387314300Anaerolinea thermophila UNI-1, complete genomehypothetical protein1e-1065.1
NC_019902:2372097:238791723879172388180264Thioalkalivibrio nitratireducens DSM 14787, complete genomehypothetical protein8e-1062.4
NC_013889:1514799:152446015244601524717258Thioalkalivibrio sp. K90mix chromosome, complete genomehypothetical protein2e-0961.2