Pre_GI: BLASTP Hits

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Query: NC_013716:2476334:2490382 Citrobacter rodentium ICC168, complete genome

Start: 2490382, End: 2490609, Length: 228

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014472:3785319:380477538047753805008234Flavobacteriales bacterium HTCC2170 chromosome, complete genomehypothetical protein5e-0959.7
NC_015563:4414854:442912844291284429334207Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein2e-0857.8
NC_010531:292044:326805326805327047243Polynucleobacter necessarius STIR1, complete genomehypothetical protein4e-0857
NC_007509:971500:973024973024973239216Burkholderia sp. 383 chromosome 3, complete sequencehypothetical protein7e-0752.8