Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:2476334:2485727 Citrobacter rodentium ICC168, complete genome

Start: 2485727, End: 2486161, Length: 435

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010468:3209326:3222525322252532267184194Escherichia coli ATCC 8739, complete genomeYD repeat protein1e-32137
NC_012967:707083:7118567118567135201665Escherichia coli B str. REL606 chromosome, complete genomerhsC element core protein RshC1e-29127
CP002185:794732:804911804911805813903Escherichia coli W, complete genome3e-29127