Pre_GI: BLASTP Hits

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Query: NC_013716:2255102:2265903 Citrobacter rodentium ICC168, complete genome

Start: 2265903, End: 2266976, Length: 1074

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011415:2346474:2357346235734623584251080Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-52206
NC_009615:644757:6608226608226618951074Parabacteroides distasonis ATCC 8503 chromosome, complete genomeO-antigen polymerase2e-1687