Pre_GI: BLASTP Hits

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Query: NC_013716:1178383:1185397 Citrobacter rodentium ICC168, complete genome

Start: 1185397, End: 1185615, Length: 219

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
CU928145:3360967:3398367339836734001541788Escherichia coli 55989 chromosome, complete genomeputative UvrD/REP helicase1e-24111
NC_011748:3360967:3398367339836734001541788Escherichia coli 55989, complete genomeputative UvrD/REP helicase1e-24111
NC_013716:5201097:5253209525320952550231815Citrobacter rodentium ICC168, complete genomeputative DNA helicase6e-23106