Pre_GI: BLASTP Hits

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Query: NC_013716:1138441:1165057 Citrobacter rodentium ICC168, complete genome

Start: 1165057, End: 1165782, Length: 726

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014532:2664139:267027626702762671076801Halomonas elongata DSM 2581, complete genomegluconate 2-dehydrogenase (acceptor)2e-53209
NC_014323:5219154:523387352338735234586714Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein1e-39163
NC_014306:4901390:492126749212674921983717Erwinia billingiae Eb661, complete genomePutative Gluconate 2-dehydrogenase (Acceptor)3e-32138
NC_008786:1767315:178133817813381782066729Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein5e-24111