Pre_GI: BLASTP Hits

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Query: NC_013714:1521404:1534279 Bifidobacterium dentium Bd1, complete genome

Start: 1534279, End: 1534557, Length: 279

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007086:2477040:2488076248807624893141239Xanthomonas campestris pv. campestris str. 8004, complete genometranscriptional regulator, HTH_3 family6e-1269.7
NC_017986:5867782:5878959587895958800531095Pseudomonas putida ND6 chromosome, complete genometranscriptional regulator6e-1269.3
NC_007645:6407370:6419499641949964206621164Hahella chejuensis KCTC 2396, complete genomepredicted Zn peptidase3e-1167
NC_017075:2733898:2746211274621127472901080Rubrivivax gelatinosus IL144, complete genometranscriptional regulator, Xre family1e-0962
NC_010322:1817598:1836753183675318378531101Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein1e-0961.6
NC_006350:3710641:3719241371924137203111071Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative transcriptional regulator2e-0961.2
NC_010508:451184:4625024625024635721071Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencehelix-turn-helix domain protein2e-0960.8