Pre_GI: BLASTP Hits

Some Help

Query: NC_013552:68003:71874 Dehalococcoides sp. VS, complete genome

Start: 71874, End: 72626, Length: 753

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Isolation: Texas; Country: USA; Temp: Mesophile; Habitat: Fresh water, Groundwater. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007356:202131:217167217167217922756Dehalococcoides sp. CBDB1, complete genomehypothetical protein2e-122438
NC_013552:68003:896818968190409729Dehalococcoides sp. VS, complete genomePP-loop ATPase4e-61234
NC_009455:273519:296763296763297491729Dehalococcoides sp. BAV1 chromosome, complete genomeputative ATP binding protein8e-60230
NC_007356:51080:795897958980335747Dehalococcoides sp. CBDB1, complete genomehypothetical protein6e-59227
NC_007356:1221500:122508512250851225819735Dehalococcoides sp. CBDB1, complete genomehypothetical protein6e-58224
NC_007356:51080:741717417175037867Dehalococcoides sp. CBDB1, complete genomehypothetical protein8e-53206
NC_011296:1151346:115500411550041155663660Thermodesulfovibrio yellowstonii DSM 11347, complete genomedomain of unknown function, putative8e-39160
NC_020291:1593143:160856116085611609217657Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomePP-loop superfamily ATP-utilizing enzyme5e-31134
NC_009617:1487110:150320215032021503864663Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeATP-binding protein2e-30132
NC_002936:285527:2968752968752985931719Dehalococcoides ethenogenes 195, complete genometranscriptional regulator, putative2e-30132
NC_009718:1470972:148152114815211482162642Fervidobacterium nodosum Rt17-B1, complete genomeputative ATP binding protein4e-26118
NC_012883:1603744:160775616077561608445690Thermococcus sibiricus MM 739, complete genomeATP-binding protein3e-21102
NC_015562:1386535:138875613887561389424669Methanotorris igneus Kol 5 chromosome, complete genomehypothetical protein2e-1582.8
NC_014122:247660:248574248574249245672Methanocaldococcus infernus ME chromosome, complete genomeATP binding protein3e-1582.4
NC_015320:790137:805434805434806102669Archaeoglobus veneficus SNP6 chromosome, complete genomeuniversal metal-binding-domain/4Fe-4S-binding-domain-containing ABC transporter protein4e-1582
NC_015636:1477221:149738414973841498052669Methanothermococcus okinawensis IH1 chromosome, complete genomeuniversal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter protein2e-1479.7
NC_013741:565389:576115576115576789675Archaeoglobus profundus DSM 5631, complete genomeATP binding protein1e-1377
NC_019942:1270060:128203912820391282704666Aciduliprofundum sp. MAR08-339, complete genomeuniversal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein5e-1375.1
NC_013665:2132000:213201121320112132673663Methanocella paludicola SANAE, complete genomehypothetical protein5e-1375.1
NC_014658:620819:641961641961642638678Methanothermus fervidus DSM 2088 chromosome, complete genomeATP binding protein7e-1374.3
NC_011184:2723000:274095727409572741628672Vibrio fischeri MJ11 chromosome I, complete sequenceconserved domain protein, putative4e-1168.6
NC_013926:1037681:105188410518841052549666Aciduliprofundum boonei T469 chromosome, complete genomeATP binding protein6e-1167.8
NC_014314:1:152361523615963728Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete1e-1067
NC_000868:571500:571740571740572372633Pyrococcus abyssi GE5, complete genomehypothetical protein4e-0961.6
NC_005213:202400:2671162671162682461131Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein9e-0960.8
NC_009954:1595743:161302316130231613727705Caldivirga maquilingensis IC-167, complete genomeputative ATP binding protein8e-0960.8
NC_014160:43486:689846898469667684Thermosphaera aggregans DSM 11486 chromosome, complete genomeATP binding protein1e-0860.5
NC_015474:105075:127436127436128080645Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein1e-0860.1
NC_008942:915871:930511930511931167657Methanocorpusculum labreanum Z, complete genomeTryptophan synthase4e-0858.5
NC_011832:1122268:112349111234911124147657Candidatus Methanosphaerula palustris E1-9c, complete genomeATP binding protein7e-0857.8
NC_015931:134601:145654145654146238585Pyrolobus fumarii 1A, complete genomehypothetical protein6e-0754.7
NC_015844:3524175:356972835697283569985258Zobellia galactanivorans, complete genomeATPase (pseudogene)1e-0653.9