Pre_GI: BLASTP Hits

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Query: NC_013552:207345:209969 Dehalococcoides sp. VS, complete genome

Start: 209969, End: 210367, Length: 399

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Isolation: Texas; Country: USA; Temp: Mesophile; Habitat: Fresh water, Groundwater. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007356:51080:852428524285613372Dehalococcoides sp. CBDB1, complete genomehypothetical protein2e-1374.7
NC_011666:2109274:212798321279832128378396Methylocella silvestris BL2, complete genometranscriptional regulator, XRE family5e-1166.2
NC_015694:48344:516785167852076399Runella slithyformis DSM 19594 plasmid pRUNSL03, complete sequencehelix-turn-helix domain-containing protein9e-1062.4
NC_014393:937000:939498939498939920423Clostridium cellulovorans 743B chromosome, complete genomehelix-turn-helix domain-containing protein2e-0961.6
NC_016935:2069562:208239820823982083063666Paenibacillus mucilaginosus 3016 chromosome, complete genomeXRE family transcriptional regulator3e-0960.5
NC_010612:957786:957786957786958202417Mycobacterium marinum M, complete genometranscriptional regulatory protein3e-0960.5
NC_013205:1123280:113253211325321133152621Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, XRE family3e-0960.5
NC_015953:4045500:406111840611184061603486Streptomyces sp. SirexAA-E chromosome, complete genomeXRE family transcriptional regulator2e-0857.8
NC_013510:747042:750032750032750469438Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family1e-0755.1
NC_015690:1542061:155511215551121555504393Paenibacillus mucilaginosus KNP414 chromosome, complete genomeXRE family transcriptional regulator2e-0754.7
NC_012563:2597934:260915726091572609615459Clostridium botulinum A2 str. Kyoto, complete genomeimmunity repressor protein2e-0754.3
NC_014483:1179286:118168111816811182154474Paenibacillus polymyxa E681 chromosome, complete genomePredicted transcriptional regulator3e-0753.9
NC_016109:3875617:387627838762783876664387Kitasatospora setae KM-6054, complete genomeputative transcriptional regulator4e-0753.5
NC_016641:2950000:295057629505762951046471Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator4e-0753.5
NC_013522:991649:100778510077851008114330Thermanaerovibrio acidaminovorans DSM 6589, complete genometranscriptional regulator, XRE family4e-0753.5
NC_014479:3245126:324993332499333250340408Bacillus subtilis subsp. spizizenii str. W23 chromosome, completetranscriptional repressor7e-0752.8
NC_008526:1924761:194337819433781944061684Lactobacillus casei ATCC 334, complete genomeTranscriptional regulator, xre family3e-0650.8
NC_015589:3852217:386234338623433862723381Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehelix-turn-helix domain-containing protein6e-0649.7