Pre_GI: BLASTP Hits

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Query: NC_013410:3787626:3799995 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3799995, End: 3800603, Length: 609

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002967:2656000:266167826616782662097420Treponema denticola ATCC 35405, complete genomehypothetical protein2e-38158
NC_021184:1729867:176299317629931763697705Desulfotomaculum gibsoniae DSM 7213, complete genomeputative thioesterase involved in non-ribosomal peptide biosynthesis2e-33142
NC_012881:1062629:108367810836781084388711Desulfovibrio salexigens DSM 2638, complete genomehypothetical protein5e-33140
NC_017219:333279:339469339469340161693Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehydrolase1e-32139
NC_011593:333488:339636339636340370735Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,alpha/beta superfamily hydrolase1e-32139
NC_014624:1369642:139653013965301397111582Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein5e-29127
NC_017078:179848:197992197992198192201Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,hypothetical protein1e-1583.2
NC_000908:421467:440359440359441180822Mycoplasma genitalium G37, complete genomehydrolase, alpha/beta fold family5e-0650.8