Pre_GI: BLASTP Hits

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Query: NC_013410:3358008:3372318 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3372318, End: 3373481, Length: 1164

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013037:2364514:2393876239387623948831008Dyadobacter fermentans DSM 18053, complete genomehypothetical protein4e-51202
NC_016109:8256000:8263881826388182649061026Kitasatospora setae KM-6054, complete genomeputative peptidase S33 family protein1e-43177
NC_013174:601434:6178696178696189331065Jonesia denitrificans DSM 20603, complete genomehypothetical protein4e-39162
NC_007333:1743890:1795269179526917964651197Thermobifida fusca YX, complete genomehypothetical protein5e-38159
NC_016781:1408235:141429214142921415290999Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeLysophospholipase L22e-35150
NC_014329:1407880:141447214144721415470999Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein2e-35150
NC_009725:2859630:289184428918442892623780Bacillus amyloliquefaciens FZB42, complete genomeYtpA6e-0755.5