Pre_GI: BLASTP Hits

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Query: NC_013410:3280039:3302766 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3302766, End: 3303869, Length: 1104

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009615:487173:4995574995575005581002Parabacteroides distasonis ATCC 8503 chromosome, complete genomehexapeptide transferase9e-25114
NC_014370:1117283:112751111275111128485975Prevotella melaninogenica ATCC 25845 chromosome chromosome I,hypothetical protein5e-2099
NC_016052:842762:887509887509888183675Tetragenococcus halophilus NBRC 12172, complete genomehypothetical protein1e-1997.4
NC_019968:891904:898674898674899672999Prevotella dentalis DSM 3688 chromosome 2, complete sequencehypothetical protein2e-1996.7
NC_014370:1117283:112848911284891129265777Prevotella melaninogenica ATCC 25845 chromosome chromosome I,hypothetical protein3e-1686.7
NC_008789:1669082:1696806169680616980081203Halorhodospira halophila SL1, complete genomehypothetical protein2e-1686.7
NC_009615:487173:4973384973384984291092Parabacteroides distasonis ATCC 8503 chromosome, complete genomehexapeptide transferase9e-1478.2
NC_009077:5286275:5292091529209152957323642Mycobacterium sp. JLS, complete genomehypothetical protein6e-1272
NC_014315:1907112:1909333190933319104661134Nitrosococcus watsoni C-113 chromosome, complete genomehypothetical protein2e-1170.5
NC_020304:2008740:2017319201731920183621044Desulfocapsa sulfexigens DSM 10523, complete genomeglutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)4e-0962.8
NC_012108:2220983:2238311223831122394111101Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein2e-0756.6