Pre_GI: BLASTP Hits

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Query: NC_013410:3280039:3285559 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3285559, End: 3286503, Length: 945

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009615:487173:495410495410496345936Parabacteroides distasonis ATCC 8503 chromosome, complete genome1-aminocyclopropane-1-carboxylate deaminase3e-109394
NC_008800:2695977:271205827120582713050993Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,D-cysteine desulfhydrase7e-33141
NC_015474:487517:497348497348498337990Pyrococcus sp. NA2 chromosome, complete genome1-aminocyclopropane-1-carboxylate deaminase2e-28126
NC_016816:1912366:194574119457411946727987Pantoea ananatis LMG 5342, complete genomeD-cysteine desulfhydrase2e-27123
NC_009717:271385:276085276085277080996Xanthobacter autotrophicus Py2 plasmid pXAUT01, complete sequence1-aminocyclopropane-1-carboxylate deaminase1e-26120
NC_016514:2950860:295648429564842957470987Enterobacter cloacae EcWSU1 chromosome, complete genomeD-cysteine desulfhydrase2e-26119
NC_013421:1954915:1956510195651019575231014Pectobacterium wasabiae WPP163, complete genomepyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family2e-26119
NC_015675:6538500:6553423655342365544361014Mesorhizobium opportunistum WSM2075 chromosome, complete genome1-aminocyclopropane-1-carboxylate deaminase5e-25115
NC_014923:5970182:5998755599875559997681014Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete1-aminocyclopropane-1-carboxylate deaminase5e-25115
NC_019973:5899142:5927712592771259287251014Mesorhizobium australicum WSM2073, complete genome1-aminocyclopropane-1-carboxylate deaminase5e-25115
NC_009436:2685910:2703396270339627044811086Enterobacter sp. 638, complete genomeD-cysteine desulfhydrase4e-25115
NC_021066:3703725:371294437129443713936993Raoultella ornithinolytica B6, complete genomeD-cysteine desulfhydrase2e-23110
NC_017082:532000:5930055930055940211017Bradyrhizobium sp. S23321, complete genome1-aminocyclopropane-1-carboxylate deaminase2e-23110
NC_009937:311242:3112423112423122581017Azorhizobium caulinodans ORS 571, complete genome1-aminocyclopropane-1-carboxylate deaminase2e-23109
NC_012912:4071859:4108130410813041091461017Dickeya zeae Ech1591, complete genome1-aminocyclopropane-1-carboxylate deaminase4e-2098.6
NC_010505:1581429:1599479159947916004891011Methylobacterium radiotolerans JCM 2831, complete genome1-aminocyclopropane-1-carboxylate deaminase1e-1997.1
NC_008697:118859:144855144855145823969Nocardioides sp. JS614 plasmid pNOCA01, complete sequence1-aminocyclopropane-1-carboxylate deaminase4e-1995.5
NC_008752:725189:7567027567027577331032Acidovorax avenae subsp. citrulli AAC00-1, complete genome1-aminocyclopropane-1-carboxylate deaminase1e-1790.5