Pre_GI: BLASTP Hits

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Query: NC_013410:3105121:3125287 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3125287, End: 3126231, Length: 945

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014623:4535544:4558966455896645606211656Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDnaJ domain-containing protein2e-0963.5
NC_019908:1296870:1306943130694313083011359Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein3e-0756.2
NC_014330:1957725:1960617196061719619751359Brachyspira pilosicoli 95/1000 chromosome, complete genomehypothetical protein3e-0756.2
NC_017243:685783:6891856891856905671383Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein3e-0756.2
NC_011899:948790:949576949576950352777Halothermothrix orenii H 168, complete genomeHelix-turn-helix5e-0755.5
NC_011296:1039749:104033510403351041108774Thermodesulfovibrio yellowstonii DSM 11347, complete genomehypothetical protein6e-0652