Pre_GI: BLASTP Hits

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Query: NC_013410:2519441:2534929 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2534929, End: 2535846, Length: 918

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005125:4557889:457222345722234573140918Gloeobacter violaceus PCC 7421, complete genomehypothetical protein1e-62239
NC_013716:3708415:371842137184213719350930Citrobacter rodentium ICC168, complete genomehypothetical protein2e-59229
NC_010554:2646806:269246626924662693404939Proteus mirabilis HI4320, complete genomeplasmid-related protein2e-58225
NC_008686:1960034:196656619665661967483918Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein5e-57221
NC_016026:1224129:124446112444611245384924Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein9e-57220
NC_008322:373531:387665387665388579915Shewanella sp. MR-7, complete genomehypothetical protein2e-56219
NC_014532:2664139:269897126989712699891921Halomonas elongata DSM 2581, complete genomedomain of unknown function DUF18141e-54213
NC_009665:2352528:237131423713142372249936Shewanella baltica OS185 chromosome, complete genomehypothetical protein9e-54210
NC_009720:464078:480613480613481530918Xanthobacter autotrophicus Py2, complete genomehypothetical protein1e-49197
NC_007086:1224867:125214212521421253068927Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein1e-48193
NC_003902:3666544:369472836947283695654927Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein1e-48193
NC_008825:2564965:256785325678532568773921Methylibium petroleiphilum PM1, complete genomehypothetical protein3e-47189
NC_011662:1017933:102433610243361025190855Thauera sp. MZ1T, complete genomeDomain of unknown function DUF18147e-42171
NC_019968:175480:184303184303185229927Prevotella dentalis DSM 3688 chromosome 2, complete sequenceprotein of unknown function (DUF1814)2e-39162
NC_015164:3997743:399849739984973999414918Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein1e-38160
NC_015311:1860666:190023719002371901184948Prevotella denticola F0289 chromosome, complete genomehypothetical protein3e-38159
NC_015458:2338437:235401823540182354944927Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein3e-37155
NC_021184:3912805:391755539175553918502948Desulfotomaculum gibsoniae DSM 7213, complete genomehypothetical protein2e-0963.5
NC_015977:3215770:323354032335403234448909Roseburia hominis A2-183 chromosome, complete genomehypothetical protein4e-0962.4
NC_012811:410776:427672427672428664993Methylobacterium extorquens AM1 megaplasmid, complete sequencehypothetical protein5e-0962