Pre_GI: BLASTP Hits

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Query: NC_013410:1591500:1614452 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1614452, End: 1615123, Length: 672

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002927:960369:971929971929972588660Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-21102
NC_002936:1004570:101403310140331014701669Dehalococcoides ethenogenes 195, complete genomehypothetical protein7e-21100
NC_004431:5123325:512262751226275123328702Escherichia coli CFT073, complete genomehypothetical protein5e-2097.8
NC_010831:1224000:123291812329181233556639Chlorobium phaeobacteroides BS1, complete genomehypothetical protein1e-1893.2
NC_008054:1030994:104138510413851042008624Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein5e-1684.3
NC_013204:989103:998858998858999487630Eggerthella lenta DSM 2243, complete genomehypothetical protein4e-1581.3
NC_016633:3069518:312358231235823124223642Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomehypothetical protein2e-1375.9
NC_015554:3808529:382636038263603827073714Alteromonas sp. SN2 chromosome, complete genomeputative cytoplasmic protein4e-1271.6
NC_013037:6281164:629661262966126297256645Dyadobacter fermentans DSM 18053, complete genomehypothetical protein2e-1065.9
NC_015635:3860570:387357438735743874242669Microlunatus phosphovorus NM-1, complete genomehypothetical protein3e-0962
NC_010655:1808657:181751018175101818112603Akkermansia muciniphila ATCC BAA-835, complete genomehypothetical protein4e-0755.1