Pre_GI: BLASTP Hits

Some Help

Query: NC_013410:1203937:1220850 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1220850, End: 1221578, Length: 729

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017095:269165:276908276908277711804Fervidobacterium pennivorans DSM 9078 chromosome, complete genomephosphoesterase1e-20100
NC_013926:1009718:103007010300701030738669Aciduliprofundum boonei T469 chromosome, complete genomephosphodiesterase, MJ0936 family8e-2097.4
NC_009718:518873:518873518873519652780Fervidobacterium nodosum Rt17-B1, complete genomephosphodiesterase4e-1995.1
NC_019942:1078837:108184510818451082513669Aciduliprofundum sp. MAR08-339, complete genomephosphoesterase, MJ0936 family7e-1994.4
NC_014002:809816:829936829936830646711Methanohalophilus mahii DSM 5219 chromosome, complete genomephosphodiesterase, MJ0936 family2e-1892.4
NC_003413:1521080:152040515204051521097693Pyrococcus furiosus DSM 3638, complete genomehypothetical protein4e-1891.7
NC_015425:1867620:187081418708141871509696Clostridium botulinum BKT015925 chromosome, complete genomephosphodiesterase4e-1891.7
NC_013665:1865122:188220618822061882871666Methanocella paludicola SANAE, complete genomeputative phosphoesterase7e-1890.9
NC_011661:1100576:110577811057781106509732Dictyoglomus turgidum DSM 6724, complete genomemetallophosphoesterase2e-1789.4
NC_000868:500249:520758520758521459702Pyrococcus abyssi GE5, complete genomehypothetical protein3e-1788.6
NC_009802:1525144:154459315445931545276684Campylobacter concisus 13826, complete genomeSer/Thr protein phosphatase family protein6e-1787.8
NC_019942:1370872:138401013840101384714705Aciduliprofundum sp. MAR08-339, complete genomephosphoesterase, MJ0936 family1e-1687
NC_020388:486803:504484504484505155672Natronomonas moolapensis 8.8.11 complete genomeMJ0936 family phosphoesterase1e-1686.7
NC_008593:1631438:163143816314381632130693Clostridium novyi NT, complete genomephosphodiesterase, MJ0936 family subfamily3e-1685.5
NC_000854:723000:725116725116725871756Aeropyrum pernix K1, complete genomehypothetical protein9e-1684
NC_008148:2290806:230424523042452305006762Rubrobacter xylanophilus DSM 9941, complete genomemetallophosphoesterase3e-1582.4
NC_011026:2533017:254044025404402541180741Chloroherpeton thalassium ATCC 35110, complete genomemetallophosphoesterase5e-1581.6
NC_015589:2100175:211899121189912119707717Desulfotomaculum ruminis DSM 2154 chromosome, complete genomemetallophosphoesterase4e-1581.6
NC_013665:1865122:188296918829691883664696Methanocella paludicola SANAE, complete genomeputative phosphoesterase1e-1480.5
NC_014221:1932903:195282619528261953596771Truepera radiovictrix DSM 17093 chromosome, complete genomemetallophosphoesterase1e-1480.1
NC_008786:3845988:386104138610413861796756Verminephrobacter eiseniae EF01-2, complete genomebis(5'nucleosyl)-tetraphosphatase, ApaH6e-1477.8
NC_005042:1422000:142791214279121428727816Prochlorococcus marinus subsp. marinus str. CCMP1375, completePredicted calcineurin family phosphoesterase3e-1375.5
NC_002927:118982:128487128487129164678Bordetella bronchiseptica RB50, complete genomeputative phosphoesterase9e-1373.9
NC_021175:997618:100230810023081003135828Streptococcus oligofermentans AS 1.3089, complete genomeSer/Thr protein phosphatase family protein2e-1272.8
NC_013282:1842412:185956918595691860303735Cronobacter turicensis, complete genomehypothetical protein1e-1170.1
NC_007516:1439537:144032214403221441137816Synechococcus sp. CC9605, complete genomehypothetical protein2e-1169.7
NC_007498:1774859:178296117829611783638678Pelobacter carbinolicus DSM 2380, complete genomepredicted phosphoesterase2e-1169.3
NC_009255:213245:218598218598219332735Burkholderia vietnamiensis G4 chromosome 2, complete sequencemetallophosphoesterase5e-1168.2
NC_012881:4023895:402837640283764029065690Desulfovibrio salexigens DSM 2638, complete genomemetallophosphoesterase7e-1064.3
NC_009659:2523874:254688425468842547585702Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein1e-0860.5
NC_011831:1336779:136290613629061363754849Chloroflexus aggregans DSM 9485, complete genomemetallophosphoesterase8e-0754.3
NC_013406:2866000:290677229067722907500729Paenibacillus sp. Y412MC10 chromosome, complete genomemetallophosphoesterase1e-0653.5