Pre_GI: BLASTP Hits

Some Help

Query: NC_013316:4095905:4124193 Clostridium difficile R20291, complete genome

Start: 4124193, End: 4125374, Length: 1182

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017179:4023139:4051427405142740526081182Clostridium difficile BI1, complete genomeintegrase0787
NC_013315:4015119:4043407404340740445881182Clostridium difficile CD196 chromosome, complete genomeintegrase0787
NC_009089:428075:4288514288514300411191Clostridium difficile 630, complete genomeintegrase0714
NC_014638:321382:3346733346733358661194Bifidobacterium bifidum PRL2010 chromosome, complete genomeDNA integration/recombination/inversion protein2e-152538
NC_015385:2050648:2073403207340320745961194Treponema succinifaciens DSM 2489 chromosome, complete genomeintegrase family protein1e-151536
NC_009442:867625:8884258884258896421218Streptococcus suis 05ZYH33 chromosome, complete genomeTn916, transposase1e-150532
NC_021175:1597613:1609065160906516102821218Streptococcus oligofermentans AS 1.3089, complete genometransposon integrase1e-150532
NC_009089:1283000:1284507128450712857001194Clostridium difficile 630, complete genomeintegrase5e-145514
NC_016630:1247251:1247251124725112484681218Filifactor alocis ATCC 35896 chromosome, complete genometransposase1e-144513
NC_017218:178564:1903011903011915481248Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomesite-specific recombinase, phage integrase family1e-135483
NC_013895:1332832:135184513518451352735891Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete8e-109394
NC_013740:1178370:1193672119367211949701299Acidaminococcus fermentans DSM 20731, complete genomeintegrase family protein4e-80298
NC_013740:1218429:1251425125142512527171293Acidaminococcus fermentans DSM 20731, complete genomeintegrase family protein4e-76285
NC_015977:3215770:3260060326006032612921233Roseburia hominis A2-183 chromosome, complete genomeintegrase/recombinase, XerC/CodV family protein3e-47189
NC_012778:229503:242460242460243146687Eubacterium eligens ATCC 27750, complete genomeintegrase/recombinase XerD8e-46184
NC_015697:1480552:1484807148480714860391233Lactobacillus reuteri SD2112 chromosome, complete genomephage integrase family site-specific recombinase3e-39162
NC_015737:2691246:2720265272026527213951131Clostridium sp. SY8519, complete genomehypothetical protein1e-25117
NC_009328:814530:8199338199338210961164Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeDNA integration/recombination/invertion protein2e-1790.5
NC_014721:729942:7313247313247325021179Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein3e-1686.3
NC_013791:875224:8922118922118932571047Bacillus pseudofirmus OF4 chromosome, complete genomehypothetical protein7e-1582
NC_019904:5308998:531160153116015312527927Echinicola vietnamensis DSM 17526 chromosome, complete genomesite-specific recombinase XerD3e-1480.1
NC_008009:1408000:1411109141110914124731365Acidobacteria bacterium Ellin345, complete genomephage integrase9e-1478.2
NC_020995:477765:4823374823374834791143Enterococcus casseliflavus EC20, complete genomehypothetical protein9e-1478.2
NC_013441:1487058:1489298148929814904701173Gordonia bronchialis DSM 43247, complete genomeintegrase family protein1e-1378.2
NC_007644:1847000:1850618185061818517901173Moorella thermoacetica ATCC 39073, complete genomePhage integrase3e-1376.6
NC_013921:1396500:1398270139827013994661197Thermoanaerobacter italicus Ab9 chromosome, complete genomeintegrase family protein4e-1375.9
NC_014210:723719:7400287400287412421215Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integrase family protein4e-1375.9
NC_015275:1034230:1035408103540810366311224Clostridium lentocellum DSM 5427 chromosome, complete genomeintegrase family protein5e-1375.9
NC_006510:2910000:2939310293931029403231014Geobacillus kaustophilus HTA426, complete genomeintegrase/recombinase7e-1375.5
NC_011899:355638:3706253706253718001176Halothermothrix orenii H 168, complete genomephage integrase family protein8e-1375.1
NC_014616:862084:8713018713018724341134Bifidobacterium bifidum S17 chromosome, complete genomeIntegrase/recombinase2e-1273.9
NC_013757:3100515:3113794311379431149271134Geodermatophilus obscurus DSM 43160, complete genomeintegrase family protein2e-1273.9
NC_014335:2274774:229993922999392300787849Bacillus cereus biovar anthracis str. CI chromosome, completeDNA integration/recombination/invertion protein2e-1273.9
NC_015957:8777644:8782868878286887841331266Streptomyces violaceusniger Tu 4113 chromosome, complete genomeintegrase family protein2e-1273.9
NC_016048:2873669:2906496290649629076981203Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase3e-1273.6
NC_008609:251608:281900281900282808909Pelobacter propionicus DSM 2379, complete genometyrosine recombinase XerC3e-1273.2
NC_013939:1812259:181857918185791819487909Deferribacter desulfuricans SSM1, complete genometyrosine recombinase3e-1273.2
NC_013199:1407742:142829114282911429190900Lactobacillus rhamnosus Lc 705, complete genometyrosine recombinase XerC subunit5e-1272.8
NC_013235:508585:5258015258015269161116Nakamurella multipartita DSM 44233, complete genomeintegrase family protein5e-1272.8
NC_014650:2969866:2987769298776929889231155Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase4e-1272.8
NC_013656:2505783:2505783250578325069671185Lactococcus lactis subsp. lactis KF147, complete genomephage integrase8e-1271.6
NC_008346:2579756:259159725915972592514918Syntrophomonas wolfei subsp. wolfei str. Goettingen, completephage integrase2e-1170.9
NC_015164:2859000:286196028619602862910951Bacteroides salanitronis DSM 18170 chromosome, complete genomeTyrosine recombinase xerC2e-1170.5
NC_008705:5144433:5149414514941451505891176Mycobacterium sp. KMS, complete genome2e-1170.5
NC_010380:254088:2540882540882552541167Streptococcus pneumoniae Hungary19A-6, complete genomeprophage Sa05, site-specific recombinase, phage integrase family3e-1170.1
NC_012469:198096:1980961980961992621167Streptococcus pneumoniae Taiwan19F-14, complete genomeprophage Sa05, site-specific recombinase, phage integrase family3e-1170.1
NC_014652:420457:453817453817454668852Caldicellulosiruptor hydrothermalis 108 chromosome, completeintegrase family protein4e-1169.7
NC_013757:3613438:363046536304653631445981Geodermatophilus obscurus DSM 43160, complete genome4e-1169.7
NC_011567:2405000:240962824096282410551924Anoxybacillus flavithermus WK1, complete genomeSite-specific recombinase XerC3e-1169.7
NC_008146:5106775:5111630511163051129311302Mycobacterium sp. MCS, complete genomephage integrase3e-1169.7
NC_019960:260997:272856272856273749894Prevotella dentalis DSM 3688 chromosome 1, complete sequencesite-specific recombinase XerD5e-1169.3
NC_014335:3589726:359683735968373597736900Bacillus cereus biovar anthracis str. CI chromosome, completetyrosine recombinase5e-1169.3
NC_005957:3665657:366765636676563668555900Bacillus thuringiensis serovar konkukian str. 97-27, completetyrosine recombinase5e-1169.3
NC_011969:3575988:357798735779873578886900Bacillus cereus Q1 chromosome, complete genomesite-specific tyrosine recombinase xerc4e-1169.3
NC_011959:131800:133752133752134702951Thermomicrobium roseum DSM 5159, complete genometransposase4e-1169.3
NC_021175:597968:6023316023316034941164Streptococcus oligofermentans AS 1.3089, complete genomephage integrase family integrase/recombinase4e-1169.3
NC_007530:3616828:364611036461103647009900Bacillus anthracis str. 'Ames Ancestor', complete genometyrosine recombinase6e-1168.9
NC_005945:3636321:364667836466783647577900Bacillus anthracis str. Sterne, complete genometyrosine recombinase6e-1168.9
NC_003997:3617000:364598336459833646882900Bacillus anthracis str. Ames, complete genometyrosine recombinase6e-1168.9
NC_012659:3617000:364601036460103646909900Bacillus anthracis str. A0248, complete genomesite-specific tyrosine recombinase XerC6e-1168.9
NC_009455:820821:8332778332778343831107Dehalococcoides sp. BAV1 chromosome, complete genomephage integrase family protein6e-1168.9
NC_008699:1132790:1159085115908511602361152Nocardioides sp. JS614, complete genomephage integrase family protein6e-1168.9
NC_015177:2642368:264457726445772645458882Pedobacter saltans DSM 12145 chromosome, complete genomeintegrase family protein8e-1168.6
NC_009328:2161116:219679821967982197712915Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeintegrase/recombinase XerD8e-1168.6
NC_014833:3667748:366955436695543670528975Ruminococcus albus 7 chromosome, complete genomeintegrase family protein9e-1168.6
NC_016114:4210173:4236833423683342379811149Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeintegrase9e-1168.2
NC_011658:3603009:363402836340283634927900Bacillus cereus AH187 chromosome, complete genomesite-specific tyrosine recombinase XerC1e-1068.2
NC_003909:3606177:362138136213813622280900Bacillus cereus ATCC 10987, complete genometyrosine recombinase1e-1067.8
NC_009012:2927793:2931283293128329323951113Clostridium thermocellum ATCC 27405, complete genomephage integrase1e-1067.8
NC_014329:1041556:104443210444321045364933Corynebacterium pseudotuberculosis FRC41 chromosome, completetyrosine recombinase2e-1067.4
NC_016781:1039716:104442310444231045355933Corynebacterium pseudotuberculosis 3/99-5 chromosome, completetyrosine recombinase XerD2e-1067.4
NC_017031:1039548:104425510442551045187933Corynebacterium pseudotuberculosis P54B96 chromosome, completetyrosine recombinase XerD2e-1067.4
NC_017301:1037519:104406810440681045000933Corynebacterium pseudotuberculosis C231 chromosome, completetyrosine recombinase XerD2e-1067.4
NC_017303:1039562:104426910442691045201933Corynebacterium pseudotuberculosis I19 chromosome, complete genometyrosine recombinase XerD2e-1067.4
NC_017305:1037133:104184010418401042772933Corynebacterium pseudotuberculosis PAT10 chromosome, completetyrosine recombinase XerD2e-1067.4
NC_008278:1876435:1889515188951518907321218Frankia alni ACN14a, complete genomeIntegrase2e-1067.4
NC_013853:2048867:2067275206727520684411167Streptococcus mitis B6, complete genomephage-related integrase, recombinase2e-1067
NC_016935:1636278:1644157164415716453111155Paenibacillus mucilaginosus 3016 chromosome, complete genometyrosine recombinase XerC2e-1067
NC_014377:1227850:123809612380961238995900Thermosediminibacter oceani DSM 16646 chromosome, complete genometyrosine recombinase XerD subunit2e-1067
NC_014171:3726054:372995937299593730858900Bacillus thuringiensis BMB171 chromosome, complete genomesite-specific tyrosine recombinase2e-1067
NC_009253:2315958:232009723200972321002906Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein2e-1067
NC_012881:1802000:183366218336621834585924Desulfovibrio salexigens DSM 2638, complete genomeintegrase family protein3e-1066.6
NC_008536:435221:442656442656443567912Solibacter usitatus Ellin6076, complete genomephage integrase family protein3e-1066.6
NC_014377:1060000:106688810668881067784897Thermosediminibacter oceani DSM 16646 chromosome, complete genometyrosine recombinase XerC3e-1066.6
NC_016510:2426150:246974824697482470641894Flavobacterium columnare ATCC 49512 chromosome, complete genomeintegrase/recombinase XerC3e-1066.6
NC_011295:33500:368853688537751867Coprothermobacter proteolyticus DSM 5265, complete genometyrosine recombinase XerD3e-1066.6
NC_018750:5293829:5316938531693853180921155Streptomyces venezuelae ATCC 10712, complete genomephage integrase family protein3e-1066.6
NC_014830:3275474:3280621328062132817451125Intrasporangium calvum DSM 43043 chromosome, complete genomeintegrase family protein3e-1066.6
NC_012034:2555447:258217025821702583021852Anaerocellum thermophilum DSM 6725, complete genomeintegrase family protein4e-1066.2
NC_013521:3204250:3209439320943932105511113Sanguibacter keddieii DSM 10542, complete genomesite-specific recombinase XerD4e-1066.2
NC_014623:1600360:1600360160036016015471188Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage integrase family protein4e-1066.2
NC_020272:1311932:1320571132057113217311161Bacillus amyloliquefaciens IT-45, complete genomeintegrase-recombinase protein4e-1065.9
NC_014623:2418762:2452315245231524535021188Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage integrase family protein6e-1065.9
NC_017208:3816753:384609438460943846993900Bacillus thuringiensis serovar chinensis CT-43 chromosome, completesite-specific tyrosine recombinase XerC7e-1065.5
NC_013205:1123280:1130843113084311320181176Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,integrase family protein7e-1065.5
NC_011768:1718869:1778114177811417793671254Desulfatibacillum alkenivorans AK-01, complete genomeintegrase family protein9e-1065.1
NC_009253:389835:392779392779393693915Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein9e-1065.1
NC_016629:3308329:333954633395463340514969Desulfovibrio africanus str. Walvis Bay chromosome, completeTyrosine recombinase xerC1e-0965.1
NC_004461:921364:929825929825930715891Staphylococcus epidermidis ATCC 12228, complete genomexerC protein1e-0964.7
NC_012793:3096095:312761731276173128495879Geobacillus sp. WCH70, complete genomeintegrase family protein1e-0964.7
NC_008595:2215244:2220320222032022214681149Mycobacterium avium 104, complete genometraSA:integrase fusion protein1e-0964.7
NC_008146:1535827:1544982154498215463101329Mycobacterium sp. MCS, complete genomephage integrase1e-0964.3
NC_007777:135222:1403051403051416001296Frankia sp. CcI3, complete genomephage integrase1e-0964.3
NC_008699:1816392:1833425183342518345611137Nocardioides sp. JS614, complete genomephage integrase family protein1e-0964.3
NC_014828:501342:4999584999585013701413Ethanoligenens harbinense YUAN-3 chromosome, complete genometranscriptional regulator, XRE family2e-0964.3
NC_008705:1537080:1549290154929015504711182Mycobacterium sp. KMS, complete genomephage integrase family protein2e-0964.3
NC_014168:1963129:198457419845741985488915Segniliparus rotundus DSM 44985 chromosome, complete genomeintegrase family protein2e-0963.9
NC_009454:1246393:124639312463931247280888Pelotomaculum thermopropionicum SI, complete genomesite-specific recombinase XerD2e-0963.9
NC_015711:7905360:7927693792769379289131221Myxococcus fulvus HW-1 chromosome, complete genomephage integrase family site specific recombinase2e-0963.9
NC_014377:961259:973403973403974335933Thermosediminibacter oceani DSM 16646 chromosome, complete genomeintegrase family protein2e-0963.9
NC_014964:2272413:2294058229405822951761119Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeintegrase family protein2e-0963.9
NC_010397:1802724:1816245181624518174141170Mycobacterium abscessus chromosome Chromosome, complete sequencePhage integrase2e-0963.9
NC_009004:2207148:2226384222638422275651182Lactococcus lactis subsp. cremoris MG1363, complete genomephage integrase3e-0963.5
NC_015425:1295261:1296334129633412974071074Clostridium botulinum BKT015925 chromosome, complete genomephage integrase family site specific recombinase3e-0963.5
NC_015875:190041:1900411900411912071167Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeintegrase3e-0963.5
NC_006322:1536426:1541375154137515425201146Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-0963.5
NC_006270:1535770:1540515154051515416601146Bacillus licheniformis ATCC 14580, complete genomeLambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core2e-0963.5
NC_012526:1345597:1347212134721213483751164Deinococcus deserti VCD115, complete genomeputative phage integrase2e-0963.5
NC_013159:2098500:2101348210134821024121065Saccharomonospora viridis DSM 43017, complete genomesite-specific recombinase XerD2e-0963.5
NC_002662:30922:4854348543497271185Lactococcus lactis subsp. lactis Il1403, complete genomeintegrase3e-0963.2
NC_017243:2955597:297425129742512975183933Brachyspira intermedia PWS/A chromosome, complete genomesite-specific recombinase XerD3e-0963.2
NC_015167:569569:590349590349591239891Cellulophaga lytica DSM 7489 chromosome, complete genomeTyrosine recombinase xerC3e-0963.2
NC_008527:2112137:2127625212762521288061182Lactococcus lactis subsp. cremoris SK11, complete genomeIntegrase3e-0963.2
NC_013921:1915377:192886319288631929738876Thermoanaerobacter italicus Ab9 chromosome, complete genomeintegrase family protein3e-0963.2
NC_010814:294394:311852311852312805954Geobacter lovleyi SZ, complete genometyrosine recombinase XerC3e-0963.2
NC_014330:505412:505412505412506278867Brachyspira pilosicoli 95/1000 chromosome, complete genometyrosine recombinase XerD5e-0962.8
NC_012925:1357783:1373875137387513750171143Streptococcus suis P1/7, complete genomephage integrase5e-0962.8
NC_012924:1446190:1462283146228314634251143Streptococcus suis SC84, complete genomephage integrase5e-0962.8
NC_019908:121178:158426158426159352927Brachyspira pilosicoli P43/6/78 chromosome, complete genometyrosine recombinase XerD5e-0962.8
NC_018607:921923:958688958688959614927Brachyspira pilosicoli B2904 chromosome, complete genometyrosine recombinase5e-0962.8
NC_014624:2569604:2574892257489225761151224Eubacterium limosum KIST612 chromosome, complete genomephage integrase4e-0962.8
NC_015573:1573621:1574928157492815760401113Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeintegrase family protein6e-0962.4
NC_019897:3057000:3064727306472730658631137Thermobacillus composti KWC4 chromosome, complete genomesite-specific recombinase XerD6e-0962.4
NC_012984:2709148:2724474272447427256071134Lactobacillus plantarum JDM1, complete genomeprophage Lp2 protein 2, integrase5e-0962.4
NC_003888:3602753:3602753360275336039071155Streptomyces coelicolor A3(2), complete genomeintegrase5e-0962.4
NC_020291:3973084:3976101397610139772791179Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometyrosine recombinase XerC-like protein5e-0962.4
NC_016783:1169821:118254811825481183483936Corynebacterium diphtheriae INCA 402 chromosome, complete genomesite-specific tyrosine recombinase XerD5e-0962.4
NC_012926:1496510:1512623151262315137651143Streptococcus suis BM407 chromosome, complete genomephage integrase5e-0962.4
NC_011757:5693584:5696052569605256971161065Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein7e-0962
NC_016048:3261166:3281077328107732822851209Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase7e-0962
NC_008095:6052139:6071158607115860721621005Myxococcus xanthus DK 1622, complete genomesite-specific recombinase, phage integrase family8e-0962
NC_007168:1705763:171536717153671716260894Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein1e-0861.6
NC_016616:2699350:275244127524412753355915Dechlorosoma suillum PS chromosome, complete genometyrosine recombinase XerD1e-0861.2
NC_013929:5248000:5267167526716752683091143Streptomyces scabiei 87.22 chromosome, complete genomeprophage integrase1e-0861.2
NC_007907:960104:974182974182975108927Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0861.2
NC_015573:813000:829706829706830560855Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeintegrase family protein1e-0861.2
NC_009921:6483660:6508769650876965099771209Frankia sp. EAN1pec, complete genomeintegrase family protein1e-0861.2
NC_014825:137485:1393521393521404311080Ruminococcus albus 7 plasmid pRUMAL02, complete sequenceintegrase family protein1e-0861.2
NC_016631:4113794:4148964414896441500041041Granulicella mallensis MP5ACTX8 chromosome, complete genomeintegrase family protein2e-0860.8
NC_014650:304441:317235317235318140906Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase2e-0860.8
NC_009253:529494:5351385351385362891152Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein2e-0860.8
NC_015660:296488:327717327717328622906Geobacillus thermoglucosidasius C56-YS93 chromosome, completeintegrase family protein2e-0860.8
NC_014650:2969866:2985102298510229862921191Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase2e-0860.8
NC_007947:2447635:248601824860182486851834Methylobacillus flagellatus KT, complete genomeTyrosine recombinase XerD2e-0860.8
NC_004070:1431146:1449370144937014504581089Streptococcus pyogenes MGAS315, complete genomeputative integrase - phage associated2e-0860.5
NC_004606:446427:4464274464274475151089Streptococcus pyogenes SSI-1, complete genomeputative integrase2e-0860.5
NC_006086:35599:3559935599366871089Streptococcus pyogenes MGAS10394, complete genomeDNA integration/recombination/invertion protein2e-0860.5
NC_017904:666285:6702366702366713931158Mycobacterium sp. MOTT36Y chromosome, complete genomeprophage integrase2e-0860.5
NC_021184:148000:156671156671157588918Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD2e-0860.5
NC_015873:1193843:1212842121284212139181077Megasphaera elsdenii DSM 20460, complete genomesite-specific recombinase2e-0860.5
NC_015757:2459424:2470235247023524714071173Sulfobacillus acidophilus TPY chromosome, complete genomePhage integrase2e-0860.5
NC_016884:1201868:1206857120685712080291173Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeintegrase family protein2e-0860.5
NC_017190:3166000:3179409317940931805661158Bacillus amyloliquefaciens LL3 chromosome, complete genometyrosine recombinase XerC2e-0860.5
NC_012793:3096095:312169431216943122599906Geobacillus sp. WCH70, complete genomeintegrase family protein2e-0860.5
NC_008148:2231045:2231045223104522321811137Rubrobacter xylanophilus DSM 9941, complete genomephage integrase2e-0860.5
NC_016048:693416:6961846961846973111128Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase2e-0860.5
NC_019673:8348604:836580883658088366806999Saccharothrix espanaensis DSM 44229 complete genomePhage integrase3e-0860.1
NC_005835:1773482:1778579177857917797571179Thermus thermophilus HB27, complete genomeDNA integration/recombination/invertion protein3e-0860.1
NC_010511:4313769:4324122432412243252641143Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein2e-0860.1
NC_012581:559182:591678591678592577900Bacillus anthracis str. CDC 684 chromosome, complete genomesite-specific tyrosine recombinase XerC4e-0859.7
NC_012526:1576775:1583384158338415847181335Deinococcus deserti VCD115, complete genomeputative Integrase4e-0859.7
NC_014624:1010193:1013752101375210149901239Eubacterium limosum KIST612 chromosome, complete genomeintegrase4e-0859.7
NC_014925:578759:5833385833385843871050Staphylococcus pseudintermedius HKU10-03 chromosome, completeIntegrase4e-0859.7
NC_003212:1713958:174643517464351747379945Listeria innocua Clip11262, complete genomehypothetical protein4e-0859.7
NC_003212:1248000:126142812614281262372945Listeria innocua Clip11262, complete genomehypothetical protein4e-0859.7
NC_014958:843456:856736856736857629894Deinococcus maricopensis DSM 21211 chromosome, complete genomeintegrase family protein3e-0859.7
NC_012471:141463:1425481425481436151068Streptococcus equi subsp. equi 4047, complete genomeintegrase3e-0859.7
NC_012472:4867210:489589848958984896866969Bacillus cereus 03BB102, complete genomesite-specific recombinase, phage integrase family3e-0859.7
NC_017297:2054000:205454220545422055534993Clostridium botulinum F str. 230613 chromosome, complete genomesite-specific recombinase, phage integrase family5e-0859.3
NC_008380:4968492:497566649756664976619954Rhizobium leguminosarum bv. viciae 3841, complete genomeputative shufflon-specific DNA recombinase5e-0859.3
NC_009615:3993187:399412339941233995028906Parabacteroides distasonis ATCC 8503 chromosome, complete genometyrosine type site-specific recombinase5e-0859.3
NC_015558:1485762:1487654148765414888141161Streptococcus parauberis KCTC 11537 chromosome, complete genomeprophage Sa05, site-specific recombinase phage integrase family protein5e-0859.3
NC_009785:387910:3914763914763926301155Streptococcus gordonii str. Challis substr. CH1, complete genomesite-specific recombinase, phage integrase family5e-0859.3
NC_015638:2045500:205110020511002051990891Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeTyrosine recombinase xerC4e-0859.3
NC_015144:734726:753581753581754486906Weeksella virosa DSM 16922 chromosome, complete genomeTyrosine recombinase xerC4e-0859.3
NC_009455:53000:820568205683015960Dehalococcoides sp. BAV1 chromosome, complete genomephage integrase family protein4e-0859.3
NC_016001:905164:911276911276912172897Flavobacterium branchiophilum, complete genomeTyrosine recombinase XerC4e-0859.3
NC_017030:8599515:8613843861384386150331191Corallococcus coralloides DSM 2259 chromosome, complete genomephage integrase family site specific recombinase7e-0858.9
NC_014960:2371989:240852724085272409405879Anaerolinea thermophila UNI-1, complete genomeputative site-specific recombinase7e-0858.9
NC_020299:127480:145428145428146327900Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeintegrase/recombinase XerD6e-0858.9
NC_013009:353690:374974374974375897924Neorickettsia risticii str. Illinois, complete genomesite-specific recombinase, phage integrase family6e-0858.9
NC_021182:4367736:4386211438621143874551245Clostridium pasteurianum BC1, complete genomesite-specific recombinase XerD6e-0858.9
NC_015958:2174731:219018821901882191063876Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeintegrase family protein6e-0858.9
NC_019897:2004050:202539420253942026296903Thermobacillus composti KWC4 chromosome, complete genomesite-specific recombinase XerD6e-0858.9
NC_008229:1397361:1397361139736113984971137Helicobacter acinonychis str. Sheeba, complete genomebacteriophage-related integrase9e-0858.5
NC_019815:761480:775648775648776571924Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiintegrase/recombinase XerD9e-0858.5
NC_018721:2759700:276193527619352762825891Psychroflexus torquis ATCC 700755 chromosome, complete genometyrosine recombinase XerC8e-0858.5
NC_014624:3463272:348210034821003483014915Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein8e-0858.5
NC_014657:2127500:214107121410712141946876Caldicellulosiruptor owensensis OL chromosome, complete genomeintegrase family protein8e-0858.5
NC_009009:2286000:2297158229715822984231266Streptococcus sanguinis SK36, complete genomeIntegrase/recombinase, phage integrase family, putative8e-0858.5
NC_020133:5485528:5502600550260055037691170Mycobacterium liflandii 128FXT, complete genomeprophage integrase7e-0858.5
NC_008726:1175999:1184203118420311861161914Mycobacterium vanbaalenii PYR-1, complete genomephage integrase family protein7e-0858.5
NC_012881:3520956:352492435249243525847924Desulfovibrio salexigens DSM 2638, complete genomeintegrase family protein1e-0758.2
NC_008054:899441:911418911418912335918Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeIntegrase/recombinase1e-0758.2
NC_013766:679906:6810926810926822431152Listeria monocytogenes 08-5578 chromosome, complete genomeintegrase1e-0758.2
NC_007503:2338110:236693823669382367876939Carboxydothermus hydrogenoformans Z-2901, complete genomesite-specific recombinase, phage integrase family1e-0758.2
NC_009785:2124883:2140291214029121415561266Streptococcus gordonii str. Challis substr. CH1, complete genomePhage integrase family domain protein1e-0758.2
NC_008025:430487:443273443273444148876Deinococcus geothermalis DSM 11300, complete genomephage integrase1e-0758.2
NC_013889:1202385:1215812121581212170501239Thioalkalivibrio sp. K90mix chromosome, complete genomeintegrase family protein1e-0758.2
NC_007760:4055860:408811340881134088940828Anaeromyxobacter dehalogenans 2CP-C, complete genomePhage integrase9e-0858.2
NC_014136:329484:3705503705503716201071Leuconostoc kimchii IMSNU11154 chromosome, complete genomeintegrase2e-0757.8
NC_014727:995480:100760710076071008524918Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,integrase1e-0757.8
NC_010338:3743000:375509337550933755617525Caulobacter sp. K31, complete genomeintegrase family protein1e-0757.8
NC_007575:973559:9778509778509790311182Sulfurimonas denitrificans DSM 1251, complete genomePhage integrase1e-0757.8
NC_004606:623853:6250706250706262241155Streptococcus pyogenes SSI-1, complete genomeputative integrase (phage associated)1e-0757.8
NC_015578:3410367:3415105341510534163131209Treponema primitia ZAS-2 chromosome, complete genomesite-specific recombinase, phage integrase family1e-0757.8
NC_009659:3520093:353927535392753540252978Janthinobacterium sp. Marseille chromosome, complete genomeintegrase1e-0757.8
NC_014814:4326500:4329829432982943317421914Mycobacterium sp. Spyr1 chromosome, complete genomesite-specific recombinase XerD1e-0757.8
NC_014391:6000834:6016628601662860177341107Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeintegrase family protein2e-0757.4
NC_015576:808926:8197348197348209031170Mycobacterium sp. JDM601 chromosome, complete genomeprophage integrase2e-0757.4
NC_003888:4377000:4390861439086143920001140Streptomyces coelicolor A3(2), complete genomeintegrase2e-0757.4
NC_010278:1989500:1989861198986119908711011Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,site-specific tyrosine recombinase XerC2e-0757.4
NC_007645:1785000:179918717991871800041855Hahella chejuensis KCTC 2396, complete genometyrosine recombinase XerD2e-0757.4
NC_009004:2477220:2481927248192724831051179Lactococcus lactis subsp. cremoris MG1363, complete genomeputative integrase2e-0757.4
NC_009338:4913510:4941691494169149436041914Mycobacterium gilvum PYR-GCK chromosome, complete genomephage integrase family protein2e-0757.4
NC_016947:666627:6723846723846734751092Mycobacterium intracellulare MOTT-02 chromosome, complete genomeprophage integrase2e-0757.4
NC_016048:1602500:161679916167991617647849Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase2e-0757
NC_012121:474144:4741444741444751931050Staphylococcus carnosus subsp. carnosus TM300, complete genomephage integrase2e-0757
NC_011283:819970:827179827179827808630Klebsiella pneumoniae 342 chromosome, complete genometyrosine recombinase3e-0757
NC_010718:1454087:145545114554511456350900Natranaerobius thermophilus JW/NM-WN-LF, complete genomeintegrase family protein3e-0756.6
NC_009613:1337536:137576313757631376659897Flavobacterium psychrophilum JIP02/86, complete genometyrosine recombinase XerC3e-0756.6
NC_002936:797110:8092918092918105981308Dehalococcoides ethenogenes 195, complete genomesite-specific recombinase, phage integrase family3e-0756.6
NC_007793:1574456:1590733159073315919381206Staphylococcus aureus subsp. aureus USA300, complete genomephiSLT ORF401-like protein, integrase3e-0756.6
NC_010079:1564327:1604680160468016058851206Staphylococcus aureus subsp. aureus USA300_TCH1516, completeintegrase3e-0756.6
NC_014721:2201790:2230397223039722315211125Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein4e-0756.2
NC_010999:2059738:2077482207748220786751194Lactobacillus casei, complete genomeIntegrase homolog4e-0756.2
NC_014666:13876:3056730567317601194Frankia sp. EuI1c chromosome, complete genomeintegrase family protein4e-0756.2
NC_011773:1277606:129570712957071296627921Bacillus cereus AH820 chromosome, complete genomeintegrase/recombinase5e-0755.8
NC_018867:1837941:1865170186517018665851416Dehalobacter sp. CF chromosome, complete genomePhage integrase5e-0755.8
NC_010939:2085000:208550420855042086424921Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTyrosine recombinase xerC5e-0755.8
NC_014205:1257652:1257652125765212586531002Staphylothermus hellenicus DSM 12710 chromosome, complete genomeintegrase family protein8e-0755.5
NC_021175:881845:8883298883298895671239Streptococcus oligofermentans AS 1.3089, complete genomeintegrase8e-0755.5
NC_014220:2037560:2053381205338120544391059Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeintegrase family protein7e-0755.5
NC_014355:288000:2962442962442972841041Candidatus Nitrospira defluvii, complete genomeputative phage integrase7e-0755.5
NC_014377:1227850:126510812651081266079972Thermosediminibacter oceani DSM 16646 chromosome, complete genomeintegrase family protein7e-0755.5
NC_004578:568236:5847805847805860211242Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family7e-0755.5
NC_014355:1223243:1233478123347812345481071Candidatus Nitrospira defluvii, complete genomeputative integrase7e-0755.5
NC_009348:1064664:106375610637561064667912Aeromonas salmonicida subsp. salmonicida A449, complete genomesite-specific integrase/recombinase6e-0755.5
NC_010814:3048441:3064888306488830660631176Geobacter lovleyi SZ, complete genomeintegrase family protein6e-0755.5
NC_016048:693416:7039477039477051071161Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase9e-0755.1
NC_015573:1573621:158153515815351582389855Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeintegrase family protein9e-0755.1
NC_007298:1418500:1441002144100214422371236Dechloromonas aromatica RCB, complete genomePhage integrase9e-0755.1
NC_013854:2148215:215822121582212159126906Azospirillum sp. B510, complete genomeintegrase1e-0655.1
NC_016048:693416:702314702314703249936Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase1e-0655.1
NC_020126:4084114:4090839409083940920531215Myxococcus stipitatus DSM 14675, complete genomephage integrase family site specific recombinase1e-0655.1
NC_007930:21793:261172611727043927Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,DNA integration/recombination/inversion protein9e-0755.1
NC_008705:1790222:1820156182015618212501095Mycobacterium sp. KMS, complete genomephage integrase family protein9e-0755.1
NC_012891:1100726:1115991111599111170791089Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,integrase8e-0755.1
NC_017047:1551836:155616615561661557152987Rahnella aquatilis HX2 chromosome, complete genomeintegrase family protein8e-0755.1
NC_016818:1605918:161022516102251611211987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completesite-specific recombinase XerD8e-0755.1
NC_015558:1389369:1411494141149414125911098Streptococcus parauberis KCTC 11537 chromosome, complete genomeputative integrase - phage associated8e-0755.1
NC_019897:3810000:3834429383442938354901062Thermobacillus composti KWC4 chromosome, complete genomesite-specific recombinase XerD9e-0755.1
NC_009053:2025782:2028258202825820292681011Actinobacillus pleuropneumoniae L20, complete genomeTyrosine recombinase xerC9e-0755.1
NC_008577:2818546:2835885283588528370631179Shewanella sp. ANA-3 chromosome 1, complete sequencephage integrase family protein1e-0654.7
NC_008555:1204000:121282412128241213768945Listeria welshimeri serovar 6b str. SLCC5334, complete genomephage integrase, putative1e-0654.7
NC_004606:877707:878690878690879601912Streptococcus pyogenes SSI-1, complete genomeputative integrase (phage associated)1e-0654.7
NC_007297:1001981:1020579102057910216671089Streptococcus pyogenes MGAS5005, complete genomephi5005.1 integrase1e-0654.7
NC_015558:905227:9268129268129279001089Streptococcus parauberis KCTC 11537 chromosome, complete genomeintegrase1e-0654.7
NC_021184:4456904:446240944624094463341933Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD1e-0654.7
NC_013766:679906:688425688425689369945Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein1e-0654.7
NC_007298:2689731:2698059269805926993271269Dechloromonas aromatica RCB, complete genomePhage integrase1e-0654.7
NC_010516:2328288:2348452234845223495161065Clostridium botulinum B1 str. Okra, complete genomesite-specific recombinase, phage integrase family2e-0654.3
NC_017208:4435573:447870544787054479703999Bacillus thuringiensis serovar chinensis CT-43 chromosome, completesite-specific tyrosine recombinase XerD2e-0654.3
NC_015953:1860946:1866376186637618676831308Streptomyces sp. SirexAA-E chromosome, complete genomeintegrase family protein2e-0654.3
NC_010556:1292232:1295910129591012970011092Exiguobacterium sibiricum 255-15, complete genome1e-0654.3
NC_014650:603500:6101966101966113951200Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase1e-0654.3
NC_018524:444217:451685451685452593909Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomephage integrase family protein1e-0654.3
NC_013009:122000:127127127127128032906Neorickettsia risticii str. Illinois, complete genometyrosine recombinase XerD2e-0653.9
NC_014011:962474:986923986923987858936Aminobacterium colombiense DSM 12261 chromosome, complete genomeintegrase family protein2e-0653.9
NC_016826:929259:9346639346639360751413Streptococcus infantarius subsp. infantarius CJ18 chromosome,Phage integrase2e-0653.9
NC_013766:1293144:129824712982471299191945Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-0653.9
NC_013768:1260317:126495112649511265895945Listeria monocytogenes 08-5923, complete genomehypothetical protein2e-0653.9
NC_014624:2996377:3006993300699330081321140Eubacterium limosum KIST612 chromosome, complete genomephage integrase family site specific recombinase2e-0653.9
NC_010424:825117:828685828685829536852Candidatus Desulforudis audaxviator MP104C, complete genomephage integrase family protein2e-0653.9
NC_014624:1204881:122192712219271222838912Eubacterium limosum KIST612 chromosome, complete genomesite-specific recombinase XerC2e-0653.9
NC_021184:1484352:151444315144431515306864Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD2e-0653.9
NC_017341:903473:9044389044389056581221Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,pathogenicity island protein, integrase2e-0653.9
NC_014221:1932903:194596319459631946841879Truepera radiovictrix DSM 17093 chromosome, complete genomeintegrase family protein2e-0653.9
NC_020207:1906803:1923725192372519248641140Enterococcus faecium NRRL B-2354, complete genomePhage integrase2e-0653.9
NC_013929:3986272:3990747399074739919641218Streptomyces scabiei 87.22 chromosome, complete genomeintegrase3e-0653.5
NC_021182:554000:5551545551545563141161Clostridium pasteurianum BC1, complete genomesite-specific recombinase XerD3e-0653.5
NC_015061:1598920:160325016032501604236987Rahnella sp. Y9602 chromosome, complete genomeintegrase family protein3e-0653.5
NC_015977:442493:4474624474624486731212Roseburia hominis A2-183 chromosome, complete genomeintegrase family protein3e-0653.5
NC_017347:2119000:2132942213294221341141173Staphylococcus aureus subsp. aureus T0131 chromosome, completeIntegrase3e-0653.5
NC_014721:2135500:215045321504532151325873Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase family protein2e-0653.5
NC_009052:2683447:2697891269789126990691179Shewanella baltica OS155, complete genomephage integrase family protein2e-0653.5
NC_014624:224213:2456182456182469731356Eubacterium limosum KIST612 chromosome, complete genomephage integrase family protein2e-0653.5
NC_021177:3997727:4017071401707140182281158Streptomyces fulvissimus DSM 40593, complete genomePhage integrase3e-0653.1
NC_016048:3667890:3691910369191036930701161Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase3e-0653.1
NC_014550:7560:2566025660270091350Arthrobacter arilaitensis Re117, complete genome3e-0653.1
NC_013406:781308:788136788136789086951Paenibacillus sp. Y412MC10 chromosome, complete genomehypothetical protein3e-0653.1
NC_018645:3029785:304322430432243044132909Desulfobacula toluolica Tol2, complete genometyrosine recombinase subunit D XerD3e-0653.1
NC_003212:2413824:243373324337332434677945Listeria innocua Clip11262, complete genomehypothetical protein4e-0652.8
NC_014815:6779538:6798594679859467998261233Micromonospora sp. L5 chromosome, complete genomeintegrase family protein4e-0652.8
NC_015589:3085442:310467231046723105562891Desulfotomaculum ruminis DSM 2154 chromosome, complete genometyrosine recombinase XerD4e-0652.8
NC_011297:1296968:129945012994501300340891Dictyoglomus thermophilum H-6-12, complete genometyrosine recombinase XerD5e-0652.8
NC_010572:4181403:4204639420463942059101272Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative phage integrase5e-0652.8
NC_012491:743883:750622750622751305684Brevibacillus brevis NBRC 100599, complete genomehypothetical protein5e-0652.8
NC_018867:1407163:142712014271201427968849Dehalobacter sp. CF chromosome, complete genomeintegrase/recombinase XerD6e-0652.4
NC_015519:2489728:250341725034172504274858Tepidanaerobacter sp. Re1 chromosome, complete genomeintegrase family protein6e-0652.4
NC_009437:2778061:278152927815292782389861Caldicellulosiruptor saccharolyticus DSM 8903, complete genomephage integrase family protein5e-0652.4
NC_020207:1614000:161891916189191619896978Enterococcus faecium NRRL B-2354, complete genomeintegrase, recombinase XerD9e-0652
NC_010816:2326453:233369523336952334633939Bifidobacterium longum DJO10A, complete genomeIntegrase9e-0651.6
NC_002758:434462:4360714360714372641194Staphylococcus aureus subsp. aureus Mu50, complete genomeintegrase homolog9e-0651.6
NC_013061:987744:991477991477992361885Pedobacter heparinus DSM 2366, complete genomeintegrase family protein9e-0651.6
NC_014551:865254:8700578700578712051149Bacillus amyloliquefaciens DSM 7, complete genomeTyrosine recombinase xerC1e-0551.6