Pre_GI: BLASTP Hits

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Query: NC_013316:4095905:4121148 Clostridium difficile R20291, complete genome

Start: 4121148, End: 4121846, Length: 699

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017179:4023139:404838240483824049080699Clostridium difficile BI1, complete genomeABC transporter permease4e-128457
NC_013315:4015119:404036240403624041060699Clostridium difficile CD196 chromosome, complete genomeABC transporter permease4e-128457
NC_015500:2112975:213742621374262138139714Treponema brennaborense DSM 12168 chromosome, complete genomehypothetical protein4e-33141
NC_013947:4979000:499175649917564992481726Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein7e-1167.4