Pre_GI: BLASTP Hits

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Query: NC_013316:4095905:4120468 Clostridium difficile R20291, complete genome

Start: 4120468, End: 4121151, Length: 684

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017179:4023139:404770240477024048385684Clostridium difficile BI1, complete genomeABC transporter permease7e-118422
NC_013315:4015119:403968240396824040365684Clostridium difficile CD196 chromosome, complete genomeABC transporter permease7e-118422
NC_015500:2112975:213813621381362138849714Treponema brennaborense DSM 12168 chromosome, complete genomeABC transporter permease5e-32137
NC_011529:766292:769859769859770563705Thermococcus onnurineus NA1, complete genomehypothetical membrane protein, conserved5e-0961.6