Pre_GI: BLASTP Hits

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Query: NC_013316:4095905:4118935 Clostridium difficile R20291, complete genome

Start: 4118935, End: 4119522, Length: 588

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013315:4015119:403814940381494038736588Clostridium difficile CD196 chromosome, complete genometranscriptional regulator1e-108391
NC_017179:4023139:404617540461754046756582Clostridium difficile BI1, complete genometranscriptional regulator3e-107387
NC_017098:1149145:118410811841081184776669Spirochaeta africana DSM 8902 chromosome, complete genometranscriptional regulator8e-0960.1
NC_015500:2112975:213977921397792140393615Treponema brennaborense DSM 12168 chromosome, complete genomeregulatory protein TetR6e-0650.8