Pre_GI: BLASTP Hits

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Query: NC_013316:4095905:4108343 Clostridium difficile R20291, complete genome

Start: 4108343, End: 4108564, Length: 222

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009089:3935500:396008339600833960304222Clostridium difficile 630, complete genomeconjugative transposon protein4e-21100
NC_017179:4023139:403557740355774035798222Clostridium difficile BI1, complete genomeconjugative transposon protein1e-2098.2
NC_013315:4015119:402755740275574027778222Clostridium difficile CD196 chromosome, complete genomeconjugative transposon protein1e-2098.2
NC_009089:428075:448992448992449213222Clostridium difficile 630, complete genomeconjugative transposon protein8e-2095.5
NC_009089:3889811:390649839064983906719222Clostridium difficile 630, complete genomeconjugative transposon conserved hypothetical protein2e-1994.4
NC_009089:581655:589261589261589482222Clostridium difficile 630, complete genomeconjugative transposon protein3e-1993.6
NC_013895:1332832:136559013655901365811222Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completehypothetical protein3e-1993.6
NC_016630:1247251:126092712609271261148222Filifactor alocis ATCC 35896 chromosome, complete genomehypothetical protein3e-1993.6
NC_004668:2198027:225950922595092259730222Enterococcus faecalis V583, complete genomehypothetical protein8e-1889
NC_017347:424500:440685440685440906222Staphylococcus aureus subsp. aureus T0131 chromosome, completeConjugative transposon protein9e-1889
NC_002758:434462:451130451130451351222Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein9e-1889
NC_017341:428500:444347444347444517171Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,hypothetical protein9e-0855.5