Pre_GI: BLASTP Hits

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Query: NC_013316:2033906:2071454 Clostridium difficile R20291, complete genome

Start: 2071454, End: 2071891, Length: 438

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016630:1247251:124944212494421249867426Filifactor alocis ATCC 35896 chromosome, complete genomesigma-70, region 4 superfamily5e-24109
NC_013895:1332832:135403613540361354458423Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completesigma-70, region 42e-23107
NC_021175:1597613:160767016076701608092423Streptococcus oligofermentans AS 1.3089, complete genomehypothetical protein2e-23107
NC_009089:581655:603157603157603582426Clostridium difficile 630, complete genomeputative conjugative transposon regulatory protein5e-23106
NC_017347:424500:425383425383425805423Staphylococcus aureus subsp. aureus T0131 chromosome, completeSigma-70 Region 4 protein1e-21101
NC_017341:428500:429045429045429527483Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,Sigma-70 Region 4 protein2e-21101
NC_002758:434462:438216438216438698483Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein2e-21101
NC_009089:3935500:394063139406313941047417Clostridium difficile 630, complete genomeconjugative transposon protein5e-1889.7
NC_012658:3678000:368489736848973685439543Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein2e-1788.2
NC_009089:428075:430953430953431381429Clostridium difficile 630, complete genomeconjugative transposon conserved hypothetical protein3e-1684
NC_009089:1283000:128664312866431287083441Clostridium difficile 630, complete genomeconjugative transposon protein3e-1477.4
NC_009089:3889811:389315038931503893572423Clostridium difficile 630, complete genomeconjugative transposon conserved hypothetical protein6e-1476.3
NC_015385:2050648:207557320755732076127555Treponema succinifaciens DSM 2489 chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family3e-1270.5
NC_017179:4023139:405102240510224051312291Clostridium difficile BI1, complete genomehypothetical protein7e-0752.8
NC_013315:4015119:404286440428644043292429Clostridium difficile CD196 chromosome, complete genomehypothetical protein1e-0651.6
NC_013316:4095905:412365041236504124078429Clostridium difficile R20291, complete genomehypothetical protein1e-0651.6