Pre_GI: BLASTP Hits

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Query: NC_013316:2033906:2053067 Clostridium difficile R20291, complete genome

Start: 2053067, End: 2053564, Length: 498

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014828:541874:555163555163555594432Ethanoligenens harbinense YUAN-3 chromosome, complete genomehypothetical protein2e-28124
NC_016048:2907702:297208829720882972498411Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-1892
NC_015977:442493:444817444817445230414Roseburia hominis A2-183 chromosome, complete genomeSigma-70 region 4 type 25e-1890.1
NC_018867:10238:174111741117833423Dehalobacter sp. CF chromosome, complete genomeDNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein3e-1684.3
NC_015500:1204501:122060612206061221025420Treponema brennaborense DSM 12168 chromosome, complete genomeSigma-70 region 4 type 26e-1683.2
NC_016627:4159406:418028941802894180711423Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA-directed RNA polymerase specialized sigma subunit5e-1580.5
NC_013316:2033906:205264020526402053092453Clostridium difficile R20291, complete genomesigma-24 (feci)1e-1479
NC_014828:1987487:201151020115102011935426Ethanoligenens harbinense YUAN-3 chromosome, complete genomehypothetical protein2e-1478.2
NC_014828:2038692:207118020711802071605426Ethanoligenens harbinense YUAN-3 chromosome, complete genomeSigma-70 region 4 type 24e-1373.9
NC_018867:10238:636876368764292606Dehalobacter sp. CF chromosome, complete genomeDNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein6e-1373.2
NC_014828:2038692:208689020868902087315426Ethanoligenens harbinense YUAN-3 chromosome, complete genomeSigma-70 region 4 type 22e-1272
NC_016048:3063888:309227030922703092680411Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein5e-0650.4