Pre_GI: BLASTP Hits

Some Help

Query: NC_013199:392450:414795 Lactobacillus rhamnosus Lc 705, complete genome

Start: 414795, End: 416279, Length: 1485

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013740:1178370:1200120120012012015561437Acidaminococcus fermentans DSM 20731, complete genomesodium/sulphate symporter7e-64245
NC_007907:456164:4655424655424670321491Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-30132
NC_007907:960104:9601049601049616541551Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-22105
NC_017068:2569609:2569609256960925711531545Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative sodium-dependent dicarboxylate transporter4e-1686.3
NC_008268:3162824:3182291318229131838981608Rhodococcus sp. RHA1, complete genomesodium symporter, ABC superfamily3e-1480.1
NC_009454:1577319:1605519160551916069491431Pelotomaculum thermopropionicum SI, complete genomedi- and tricarboxylate transporters2e-1274.3
NC_009092:2902171:2929103292910329304941392Shewanella loihica PV-4, complete genomeanion transporter6e-1272.8
NC_014831:2224733:2239157223915722405991443Thermaerobacter marianensis DSM 12885 chromosome, complete genomeanion transporter7e-1272.4
NC_009707:36024:5459854598559651368Campylobacter jejuni subsp. doylei 269.97 chromosome, completeCitT protein2e-1170.5
NC_007644:362000:3877203877203891321413Moorella thermoacetica ATCC 39073, complete genomeanion transporter9e-1168.9
NC_014328:3120145:3120775312077531222231449Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative sodium:sulfate symporter2e-1067.8
NC_006138:857692:8633748633748652541881Desulfotalea psychrophila LSv54, complete genomesimilar to Na/dicarboxylate cotransporter2e-1067.8
NC_018524:2423016:2441234244123424427991566Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeNa+ symporter family protein2e-1067.8
NC_013523:959625:9596259596259612171593Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeanion transporter3e-1067
NC_016787:135677:1447671447671463411575Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein5e-1066.2
NC_016782:152764:1570571570571586311575Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein7e-1065.9
NC_016799:167362:1726521726521742261575Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein8e-1065.5
NC_016800:163436:1677651677651693391575Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein9e-1065.5
NC_015216:328598:3459073459073473041398Methanobacterium sp. AL-21 chromosome, complete genomeanion transporter4e-0963.2
NC_018524:2423016:2442893244289324444581566Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeNa+ symporter family protein1e-0861.6
NC_015740:2614317:2616696261669626181441449Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completedi- and tricarboxylate transporter8e-0755.8
NC_008309:190550:2195322195322209201389Haemophilus somnus 129PT, complete genomeconserved transporter, NadC family7e-0755.8
NC_010519:71365:9273592735941231389Haemophilus somnus 2336 chromosome, complete genomeanion transporter7e-0755.8
NC_009655:195500:2166372166372180941458Actinobacillus succinogenes 130Z chromosome, complete genomeanion transporter1e-0655.1
NC_007519:1244198:1266034126603412673801347Desulfovibrio alaskensis G20 chromosome, complete genomecation transporter4e-0653.5
NC_012472:2109719:2130993213099321324231431Bacillus cereus 03BB102, complete genomesodium/solute symporter family protein7e-0652.4