Pre_GI: BLASTP Hits

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Query: NC_013199:2058857:2073281 Lactobacillus rhamnosus Lc 705, complete genome

Start: 2073281, End: 2074099, Length: 819

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010508:933862:938441938441939340900Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencerhamnosyltransferase3e-24112
NC_020210:3341976:340168834016883402599912Geobacillus sp. GHH01, complete genomedTDP-rhamnosyl transferase6e-2097.8
NC_012815:1603916:164266216426621643498837Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeglycosyl transferase family protein6e-1994.7
NC_012814:1599241:164294416429441643780837Bifidobacterium animalis subsp. lactis Bl-04, complete genomeglycosyl transferase family protein6e-1994.7
NC_017214:299637:340173340173341009837Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeRfbF6e-1994.7
NC_017215:1605917:164757816475781648414837Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Hexosyltransferase6e-1994.7
NC_017216:1603000:164259016425901643426837Bifidobacterium animalis subsp. lactis BLC1, complete genomeglycosyltransferase, group 2 family protein6e-1994.7
NC_017217:1607679:164823116482311649067837Bifidobacterium animalis subsp. lactis V9 chromosome, completeglycosyl transferase family protein6e-1994.7
NC_013730:5989387:600466460046646005533870Spirosoma linguale DSM 74, complete genomeglycosyl transferase, group 2 family protein1e-1894
NC_004741:2081649:209589320958932096783891Shigella flexneri 2a str. 2457T, complete genomedTDP-rhamnosyl transferase1e-1894
NC_017328:2153083:216732721673272168217891Shigella flexneri 2002017 chromosome, complete genomedTDP-rhamnosyl transferase rfbF1e-1894
NC_012691:3126500:313712831371283137997870Tolumonas auensis DSM 9187, complete genomerhamnosyltransferase9e-1994
NC_004337:2098736:211302621130262113916891Shigella flexneri 2a str. 301, complete genomedTDP-rhamnosyl transferase1e-1893.6
NC_010468:1775000:179109217910921791979888Escherichia coli ATCC 8739, complete genomeglycosyl transferase family 23e-1892.8
NC_018868:569423:579542579542580405864Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomerhamnosyltransferase5e-1891.7
NC_008228:3841897:384786338478633848729867Pseudoalteromonas atlantica T6c, complete genomerhamnosyltransferase6e-1891.3
NC_010622:2576110:259994125999412600852912Burkholderia phymatum STM815 chromosome 1, complete sequencerhamnosyltransferase1e-1790.5
NC_010995:4117963:413709041370904137989900Cellvibrio japonicus Ueda107, complete genomeglycosyl transferase, putative, gt2D2e-1789.7
NC_015376:903939:905671905671906609939Burkholderia gladioli BSR3 chromosome chromosome 2, completeRhamnosyltransferase4e-1789
NC_007606:1999870:201345420134542014365912Shigella dysenteriae Sd197, complete genomerhamnosyl transferase I9e-1787.4
NC_010610:107500:117881117881118753873Lactobacillus fermentum IFO 3956, complete genomeputative glycosyltransferases2e-1685.9
NC_015731:447411:452489452489453412924Nitrosomonas sp. Is79A3 chromosome, complete genomerhamnosyltransferase6e-1684.7
NC_012968:1108687:112544511254451126395951Methylotenera mobilis JLW8, complete genomerhamnosyltransferase2e-1582.8
NC_008258:2100646:211489121148912115652762Shigella flexneri 5 str. 8401, complete genomedTDP-rhamnosyl transferase4e-1582
NC_008553:1038344:104944910494491050342894Methanosaeta thermophila PT, complete genomeglycosyl transferase, family 29e-1580.9
NC_011026:2450325:246779324677932468668876Chloroherpeton thalassium ATCC 35110, complete genomeglycosyl transferase family 22e-1479.7
NC_010682:661272:669138669138670064927Ralstonia pickettii 12J chromosome 1, complete sequencerhamnosyltransferase3e-1479.3
NC_010125:3467379:348094034809403481905966Gluconacetobacter diazotrophicus PAl 5, complete genomeputative glycosyl transferase2e-1479.3
NC_015556:4074367:408273840827384083694957Pseudomonas fulva 12-X chromosome, complete genomeglycosyl transferase family 21e-1377
NC_014207:1366766:137902513790251379933909Methylotenera sp. 301 chromosome, complete genomerhamnosyltransferase2e-1376.3
NC_012984:1074721:108683010868301087747918Lactobacillus plantarum JDM1, complete genomeglycosyltransferase4e-1375.5
NC_014306:3210311:324994332499433250839897Erwinia billingiae Eb661, complete genomeRhamnosyltransferase4e-1375.5
NC_010658:1090104:110671711067171107664948Shigella boydii CDC 3083-94, complete genomeWbwY4e-1375.1
NC_004342:1648977:166515416651541666065912Leptospira interrogans serovar Lai str. 56601 chromosome I,dTDP-rhamnosyl transferase rfbF1e-1273.9
NC_021066:460292:479609479609480475867Raoultella ornithinolytica B6, complete genomedtdp-rhamnosyl transferase rfbf protein1e-1273.6
NC_009483:3544333:355464535546453555556912Geobacter uraniireducens Rf4 chromosome, complete genomeglycosyltransferase-like protein2e-1273.2
NC_020541:625925:646324646324647262939Rhodanobacter sp. 2APBS1, complete genomeputative glycosyltransferase3e-1272.4
NC_014500:1491660:151009615100961511010915Dickeya dadantii 3937 chromosome, complete genomedTDP-rhamnosyl transferase rfbF4e-1168.9
NC_015737:2691246:275970827597082760505798Clostridium sp. SY8519, complete genomeputative glycosyltransferase4e-1168.9
NC_012815:1603916:162252616225261623419894Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeglycosyltransferase9e-1167.8
NC_012814:1599241:162280816228081623701894Bifidobacterium animalis subsp. lactis Bl-04, complete genomeglycosyltransferase9e-1167.8
NC_011835:733320:753736753736754629894Bifidobacterium animalis subsp. lactis AD011 chromosome, completeEpsQ protein9e-1167.8
NC_017214:299637:320048320048320941894Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeRfbF9e-1167.8
NC_017215:1605917:162744216274421628335894Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Hexosyltransferase9e-1167.8
NC_017216:1603000:162245316224531623346894Bifidobacterium animalis subsp. lactis BLC1, complete genomeglycosyl transferase, family 29e-1167.8
NC_017217:1607679:162809516280951628988894Bifidobacterium animalis subsp. lactis V9 chromosome, completeglycosyltransferase9e-1167.8
NC_017217:1607679:164728516472851648238954Bifidobacterium animalis subsp. lactis V9 chromosome, completeputative glycosyltransferase2e-1066.2
NC_017216:1603000:164164416416441642597954Bifidobacterium animalis subsp. lactis BLC1, complete genomeglycosyltransferase, group 2 family protein2e-1066.2
NC_017215:1605917:164663216466321647585954Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Hexosyltransferase2e-1066.2
NC_017214:299637:339227339227340180954Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeRfbF2e-1066.2
NC_012814:1599241:164199816419981642951954Bifidobacterium animalis subsp. lactis Bl-04, complete genomeputative glycosyltransferase2e-1066.2
NC_012815:1603916:164171616417161642669954Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeputative glycosyltransferase2e-1066.2
NC_020541:1014176:102126210212621022212951Rhodanobacter sp. 2APBS1, complete genomeputative glycosyltransferase4e-1065.5
NC_017217:1607679:163571316357131636576864Bifidobacterium animalis subsp. lactis V9 chromosome, completeglycosyl transferase family protein5e-1065.1
NC_017216:1603000:163007116300711630934864Bifidobacterium animalis subsp. lactis BLC1, complete genomeglycosyl transferase, group 2 family protein5e-1065.1
NC_017215:1605917:163506016350601635923864Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,hypothetical protein5e-1065.1
NC_017214:299637:327666327666328529864Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeRfbF5e-1065.1
NC_012815:1603916:163014416301441631007864Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeglycosyl transferase, group 2 family protein5e-1065.1
NC_012814:1599241:163042616304261631289864Bifidobacterium animalis subsp. lactis Bl-04, complete genomeglycosyl transferase, group 2 family protein5e-1065.1
NC_014562:2049921:205788920578892058638750Pantoea vagans C9-1 chromosome, complete genomedTDP-rhamnosyl transferase6e-1064.7
NC_010482:841609:850484850484851323840Candidatus Korarchaeum cryptofilum OPF8, complete genomeglycosyl transferase family 26e-1064.7
NC_007606:1999870:201258120125812013429849Shigella dysenteriae Sd197, complete genomerhamnosyl transferase II1e-0963.9
NC_015385:1406419:142693714269371427650714Treponema succinifaciens DSM 2489 chromosome, complete genomeglycosyl transferase family protein1e-0963.5
NC_013665:231023:2453232453232481662844Methanocella paludicola SANAE, complete genomehypothetical protein2e-0963.5
NC_012691:3126500:313622231362223137103882Tolumonas auensis DSM 9187, complete genomeglycosyl transferase family 22e-0963.2
NC_017187:1683619:169961416996141700498885Arcobacter butzleri ED-1, complete genomeputative glycosyltransferase3e-0962.4
NC_013769:914000:933869933869934831963Sulfolobus islandicus L.D.8.5 chromosome, complete genomefamily 2 glycosyl transferase8e-0961.2
NC_011886:2696671:270983827098382710767930Arthrobacter chlorophenolicus A6, complete genomeglycosyl transferase family 22e-0756.2
NC_013665:1922000:1932534193253419335981065Methanocella paludicola SANAE, complete genomeputative glycosyltransferase9e-0754.3