Pre_GI: BLASTP Hits

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Query: NC_013199:2058857:2069107 Lactobacillus rhamnosus Lc 705, complete genome

Start: 2069107, End: 2070096, Length: 990

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016602:103878:1344911344911355041014Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein2e-49196
NC_013850:1658010:167208016720801673063984Klebsiella variicola At-22 chromosome, complete genomecapsular exopolysaccharide biosynthesis protein (Wzm)6e-49194
NC_008741:81914:1098201098201117511932Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,Methyltransferase type 112e-21103
NC_005863:80843:9209192091940221932Desulfovibrio vulgaris subsp. vulgaris str. Hildenboroughhypothetical protein2e-21103