Pre_GI: BLASTP Hits

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Query: NC_013198:36829:45070 Lactobacillus rhamnosus GG, complete genome

Start: 45070, End: 46026, Length: 957

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020272:3325000:3333612333361233358972286Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein5e-2098.6
NC_017190:591139:6045276045276068122286Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein9e-2097.8
NC_014551:605855:6190086190086212932286Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein9e-2097.8
NC_000964:1474451:1478441147844114807232283Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein8e-1787.8
NC_019896:2579036:2588470258847025907522283Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein9e-1787.8
NC_015957:2781740:2791615279161527939842370Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein5e-1065.5
NC_013198:36829:4684946849485191671Lactobacillus rhamnosus GG, complete genomepredicted ORF1e-0861.2
NC_014828:1335154:1342755134275513463783624Ethanoligenens harbinense YUAN-3 chromosome, complete genomeSH3 domain protein9e-0858.2
NC_014828:1335154:1347945134794513491111167Ethanoligenens harbinense YUAN-3 chromosome, complete genomehypothetical protein2e-0653.5
NC_014828:1335154:1350713135071313528122100Ethanoligenens harbinense YUAN-3 chromosome, complete genomehypothetical protein2e-0653.5