Pre_GI: BLASTP Hits

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Query: NC_013008:4738083:4740612 Escherichia coli O157:H7 str. TW14359 chromosome, complete genome

Start: 4740612, End: 4741571, Length: 960

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O157:H7 str. TW14359 was isolated from spinach during the E. coli outbreak in 2006. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:4567820:456897045689704569929960Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA-binding transcriptional regulator YidZ1e-168592
NC_011353:4782040:478456947845694785528960Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA-binding transcriptional regulator YidZ1e-168592
NC_002695:4678945:468147446814744682433960Escherichia coli O157:H7 str. Sakai, complete genomeputative transcriptional regulator LYSR-type1e-168592
NC_002655:4747926:475045547504554751414960Escherichia coli O157:H7 EDL933, complete genomeputative transcriptional regulator LYSR-type6e-168590
NC_011751:4373961:437649143764914377450960Escherichia coli UMN026 chromosome, complete genomeDNA-binding transcriptional regulator YidZ6e-166583
NC_010498:4166903:416943341694334170392960Escherichia coli SMS-3-5, complete genomeLysR family transcriptional regulator4e-165580
NC_011750:4490573:449310344931034494062960Escherichia coli IAI39 chromosome, complete genomeDNA-binding transcriptional regulator YidZ4e-165580
NC_009648:4497749:451456145145614515520960Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA-binding transcriptional regulator YidZ8e-124443
NC_006371:1411335:144096814409681441873906Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical transcriptional regulator, LysR family2e-24113
NC_020211:103371:126887126887127789903Serratia marcescens WW4, complete genomeLysR family transcriptional regulator9e-23107
NC_010505:2530476:2551319255131925523201002Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family8e-2097.8
NC_010943:1332243:133936213393621340264903Stenotrophomonas maltophilia K279a, complete genomeputative LysR family transcriptional regulator3e-1892.8
NC_016027:2512297:2523752252375225248161065Gluconacetobacter xylinus NBRC 3288, complete genomeLysR family transcriptional regulator2e-1790.1
NC_010172:5036385:504634750463475047306960Methylobacterium extorquens PA1, complete genomeLysR substrate-binding4e-1789
NC_014217:4550544:458732945873294588243915Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, LysR family9e-1787.8
NC_012988:5516872:553280755328075533766960Methylobacterium extorquens DM4, complete genomeLysR family transcriptional regulator9e-1787.8
NC_003296:262118:276258276258277172915Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN2e-1686.3
NC_009524:861500:878447878447879355909Psychrobacter sp. PRwf-1 chromosome, complete genomeLysR family transcriptional regulator5e-1685.5
NC_009439:3535152:354860435486043549542939Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator1e-1584
NC_008786:5128363:513497951349795135926948Verminephrobacter eiseniae EF01-2, complete genometranscriptional regulator, LysR family2e-1583.2
NC_013592:2338403:235105423510542351965912Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family4e-1582.4
NC_002947:4167500:417027541702754171180906Pseudomonas putida KT2440, complete genometranscriptional regulator, LysR family4e-1582.4
NC_008392:1029134:104404010440401044942903Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, LysR family1e-1480.9
NC_010557:679656:712468712468713370903Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LysR family1e-1480.9
NC_011365:1865687:188826518882651889218954Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator2e-1480.1
NC_009937:311242:314202314202315176975Azorhizobium caulinodans ORS 571, complete genomeputative transcriptional regulator2e-1480.1
NC_014013:112008:129080129080130036957Sphingobium japonicum UT26S chromosome 2, complete genomeLysR-family transcriptional regulator4e-1479.3
NC_021066:4177217:418936241893624190264903Raoultella ornithinolytica B6, complete genomeputative transcriptional regulator6e-1478.6
NC_010125:1011430:101697210169721017925954Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, LysR family8e-1478.2
NC_010581:2999002:299900229990022999895894Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, LysR family9e-1477.8
NC_015138:201323:211862211862212773912Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator1e-1377.8
NC_007953:938346:945917945917946852936Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, LysR family1e-1274.3
NC_015957:7348269:739581873958187396717900Streptomyces violaceusniger Tu 4113 chromosome, complete genomeLysR family transcriptional regulator1e-1274.3
NC_017986:5467279:547918954791895480121933Pseudomonas putida ND6 chromosome, complete genomeLysR family transcriptional regulator2e-1273.9
NC_011000:3362382:337903133790313379969939Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein2e-1273.6
NC_014641:20103:410434104341975933Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceHTH-type transcriptional activator NahR 32e-1273.6
NC_007511:3512100:353444735344473535373927Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-1273.2
NC_009512:3068495:307157930715793072511933Pseudomonas putida F1, complete genometranscriptional regulator, LysR family5e-1272
NC_008392:1029134:106160010616001062565966Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, LysR family5e-1272
NC_008061:2368517:239821323982132399139927Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, LysR family7e-1271.6
NC_009439:2427120:243460724346072435509903Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator9e-1271.2
NC_009436:3807420:381830238183023819228927Enterobacter sp. 638, complete genomeLysR family transcriptional regulator1e-1170.9
NC_004603:1464000:146748614674861468466981Vibrio parahaemolyticus RIMD 2210633 chromosome I, completetranscriptional regulator, LysR family2e-1170.1
NC_016830:3230939:325379932537993254713915Pseudomonas fluorescens F113 chromosome, complete genomeprotein MexT2e-1170.1
NC_015379:3736500:373842937384293739343915Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family2e-1170.1
NC_010524:4402478:442545844254584426423966Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family3e-1169.7
NC_014623:1883259:189844618984461899354909Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeLysR family transcriptional regulator3e-1169.7
NC_010125:2295500:229847122984712299397927Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional Regulator, LysR family4e-1169.3
NC_011365:502620:505292505292506218927Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator4e-1169.3
NC_013446:2919005:293064129306412931594954Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family4e-1169.3
NC_013446:2130021:214234221423422143295954Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family3e-1169.3
NC_015376:903939:913862913862914785924Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, LysR family4e-1168.9
NC_006569:370846:381777381777382751975Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencetranscriptional regulator, LysR family5e-1168.9
NC_011365:1865687:189835118983511899322972Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator6e-1168.6
NC_008752:166877:1820701820701833681299Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family2e-1067
NC_007511:3512100:352254135225413523473933Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-1066.6
NC_013446:2961647:296904529690452969968924Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family2e-1066.6
NC_015381:1705383:170681117068111707734924Burkholderia gladioli BSR3 chromosome 1, complete sequence3e-1066.2
NC_008782:3252092:325901532590153259920906Acidovorax sp. JS42, complete genometranscriptional regulator, LysR family3e-1066.2
NC_012912:4167429:417109541710954172015921Dickeya zeae Ech1591, complete genometranscriptional regulator, LysR family4e-1065.5
NC_020181:1317647:131764713176471318570924Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator, LysR family6e-1065.1
NC_020209:1986503:200880320088032009744942Pseudomonas poae RE*1-1-14, complete genomeLysR family transcription regulator protein8e-1064.7
NC_011283:785973:800657800657801586930Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator4e-0962.8
NC_007645:3756654:375780337578033758747945Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator4e-0962.4
NC_014311:3348102:336671533667153367680966Ralstonia solanacearum PSI07 chromosome, complete genomeHTH-type transcriptional regulator syrM 14e-0962.4
NC_008541:2119883:213613321361332137020888Arthrobacter sp. FB24 chromosome 1, complete sequencetranscriptional regulator, LysR family5e-0962
NC_010511:4258000:427139842713984272324927Methylobacterium sp. 4-46 chromosome, complete genomeLysR family transcriptional regulator8e-0961.6
NC_016830:1645879:166486316648631665786924Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator2e-0860.1
NC_010625:1602191:162819216281921629166975Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, LysR family2e-0860.1
NC_014121:2090630:210224621022462103172927Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacterial regulatory protein, LysR3e-0859.7
NC_009664:63230:832028320284113912Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, LysR family4e-0859.3
NC_014012:1421979:142218014221801423097918Shewanella violacea DSS12, complete genometranscriptional regulator, LysR family4e-0858.9
NC_015424:2316228:231775323177532318688936Aeromonas veronii B565 chromosome, complete genomeLysR family transcriptional regulator5e-0858.9
NC_007712:3629358:364621536462153646823609Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator6e-0858.5
NC_004129:926479:928082928082928957876Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family6e-0858.5
NC_004129:3452885:348876534887653489682918Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family7e-0858.2
NC_017047:4298207:431741043174104318366957Rahnella aquatilis HX2 chromosome, complete genomeLysR family transcriptional regulator2e-0757
NC_015061:4203767:4223495422349542245111017Rahnella sp. Y9602 chromosome, complete genomeLysR family transcriptional regulator2e-0756.6
NC_009997:2069894:208252920825292083422894Shewanella baltica OS195, complete genometranscriptional regulator, LysR family2e-0756.6
NC_016901:2070121:208311620831162084009894Shewanella baltica OS678 chromosome, complete genomeLysR family transcriptional regulator2e-0756.6
NC_011368:678291:683316683316684248933Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201,LysR family transcriptional regulator3e-0756.2
NC_020126:9938287:994969299496929950684993Myxococcus stipitatus DSM 14675, complete genomeLysR family transcriptional regulator4e-0755.8
NC_015727:1357095:137410813741081374824717Cupriavidus necator N-1 plasmid BB1p, complete sequenceLysR family transcriptional regulator7e-0755.1
NC_018678:87064:107354107354108277924Alteromonas macleodii str. 'English Channel 673' chromosome,LysR family transcriptional regulator8e-0754.7