Pre_GI: BLASTP Hits

Some Help

Query: NC_012967:1546000:1566567 Escherichia coli B str. REL606 chromosome, complete genome

Start: 1566567, End: 1567103, Length: 537

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012947:2228235:223380422338042234286483Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein6e-81299
NC_016902:2395578:240374724037472404310564Escherichia coli KO11FL chromosome, complete genomefimbrial protein domain-containing protein2e-56217
CP002516:2395578:240374724037472404310564Escherichia coli KO11, complete genomeFimbrial protein domain-containing protein2e-56217
CP002185:1681327:170153817015381702101564Escherichia coli W, complete genomeputative fimbrial protein2e-56217
NC_007946:1632025:165034616503461650957612Escherichia coli UTI89, complete genomeputative Fml fimbriae subunit8e-56216
NC_011742:1574036:158927315892731589884612Escherichia coli S88 chromosome, complete genomemajor fimbrial subunit FmlA8e-56216
NC_011751:1770376:179058817905881791199612Escherichia coli UMN026 chromosome, complete genomeputative major fimbrial subunit FmlA5e-56216
CP002797:1591000:160314216031421603606465Escherichia coli NA114, complete genometype 1 fimbrial protein5e-56216
CU928160:1579375:159958615995861600197612Escherichia coli IAI1 chromosome, complete genomeputative major fimbrial subunit FmlA5e-56216
NC_011741:1579375:159958615995861600197612Escherichia coli IAI1 chromosome, complete genomeputative major fimbrial subunit FmlA5e-56216
NC_002655:1966464:197404619740461974609564Escherichia coli O157:H7 EDL933, complete genomeputative major fimbrial subunit1e-55215
NC_004741:4364235:437265243726524373200549Shigella flexneri 2a str. 2457T, complete genomemajor type 1 subunit fimbrin (pilin)4e-34144
NC_004337:4374500:438155643815564382104549Shigella flexneri 2a str. 301, complete genomemajor type 1 subunit fimbrin (pilin)4e-34144
NC_008258:4345400:435222443522244352772549Shigella flexneri 5 str. 8401, complete genomemajor type 1 subunit fimbrin (pilin)4e-34144
NC_017328:4417000:442400144240014424549549Shigella flexneri 2002017 chromosome, complete genomeType-1 fimbrial major subunit4e-34144
NC_013361:5580741:559163055916305592178549Escherichia coli O26:H11 str. 11368 chromosome, complete genomemajor type 1 subunit fimbrin (pilin) FimA3e-34144
NC_011750:4978000:499056849905684991116549Escherichia coli IAI39 chromosome, complete genomemajor type 1 subunit fimbrin4e-34143
NC_013941:5219841:523628752362875236835549Escherichia coli O55:H7 str. CB9615 chromosome, complete genomemajor type 1 subunit fimbrin7e-34142
NC_013008:5411285:542771554277155428263549Escherichia coli O157:H7 str. TW14359 chromosome, complete genomemajor type 1 subunit fimbrin7e-34142
NC_011353:5455224:547165454716545472202549Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype-1 fimbrial protein-like protein7e-34142
NC_002695:5381576:539800653980065398554549Escherichia coli O157:H7 str. Sakai, complete genomeFimA7e-34142
NC_011742:4873351:488593248859324886486555Escherichia coli S88 chromosome, complete genomemajor type 1 subunit fimbrin (pilin)2e-33141
NC_007613:4403070:441689644168964417444549Shigella boydii Sb227, complete genomemajor type 1 subunit fimbrin4e-33140
NC_004431:5123325:513778951377895138394606Escherichia coli CFT073, complete genomeType-1 fimbrial protein, A chain precursor5e-33140
NC_011745:5114500:512939151293915129939549Escherichia coli ED1a chromosome, complete genomemajor type 1 subunit fimbrin5e-33140
NC_008253:4817864:484835348483534848901549Escherichia coli 536, complete genometype-1 fimbrial major subunit5e-33140
NC_011751:5070597:508247450824745083022549Escherichia coli UMN026 chromosome, complete genomemajor type 1 subunit fimbrin1e-30132
NC_000913:4528278:454113845411384541686549Escherichia coli K12, complete genomemajor type 1 subunit fimbrin (pilin)1e-30132
AC_000091:4534935:454779545477954548343549Escherichia coli W3110 DNA, complete genomemajor type 1 subunit fimbrin1e-30132
NC_012759:4467288:447962344796234480171549Escherichia coli BW2952 chromosome, complete genomemajor type 1 subunit fimbrin (pilin)1e-30132
NC_012947:3883484:388953138895313890079549Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein1e-30132
NC_012967:4510393:452402945240294524577549Escherichia coli B str. REL606 chromosome, complete genomemajor type 1 subunit fimbrin (pilin)1e-30132
CU928160:4570498:460375746037574604305549Escherichia coli IAI1 chromosome, complete genomemajor type 1 subunit fimbrin (pilin)2e-30131
CP002516:4199133:420676642067664207314549Escherichia coli KO11, complete genomeFimbrial protein domain-containing protein2e-30131
CP002185:4791811:480555648055564806104549Escherichia coli W, complete genomeputative fimbrial subunit protein2e-30131
CP002797:4656327:467108046710804671628549Escherichia coli NA114, complete genomePutative type 1 fimbriae major subunit FimA2e-30131
NC_011741:4570498:460375746037574604305549Escherichia coli IAI1 chromosome, complete genomemajor type 1 subunit fimbrin2e-30131
NC_013364:5255700:527326252732625273810549Escherichia coli O111:H- str. 11128, complete genomemajor type 1 subunit fimbrin (pilin) FimA2e-30131
NC_016902:4199133:420676642067664207314549Escherichia coli KO11FL chromosome, complete genomefimbrial protein domain-containing protein2e-30131
NC_007946:4875997:490785749078574908411555Escherichia coli UTI89, complete genometype 1 fimbriae major subunit FimA5e-30130
NC_011741:1579375:160060616006061600785180Escherichia coli IAI1 chromosome, complete genomeputative transcriptional regulator9e-30129
CU928160:1579375:160060616006061600785180Escherichia coli IAI1 chromosome, complete genomeputative transcriptional regulator9e-30129
NC_010498:4930649:494773849477384948286549Escherichia coli SMS-3-5, complete genometype-1 fimbrial protein9e-29126
AC_000091:1574000:159207115920711592250180Escherichia coli W3110 DNA, complete genomepredicted transcriptional regulator1e-28125
NC_000913:1570431:158838115883811588560180Escherichia coli K12, complete genomepredicted transcriptional regulator1e-28125
NC_010473:1661000:167800616780061678185180Escherichia coli str. K-12 substr. DH10B, complete genomepredicted transcriptional regulator1e-28125
CP002516:2395578:240311324031132403315203Escherichia coli KO11, complete genome1e-28125
NC_016612:5296076:532480953248095325351543Klebsiella oxytoca KCTC 1686 chromosome, complete genomefimbrial protein3e-26117
NC_011283:819970:825078825078825626549Klebsiella pneumoniae 342 chromosome, complete genometype-1 fimbrial protein4e-26117
NC_010694:3178842:319544431954443196049606Erwinia tasmaniensis, complete genomeType-1 fimbrial protein, FimA9e-26116
NC_011750:1849561:186886318688631869042180Escherichia coli IAI39 chromosome, complete genome8e-26116
NC_004431:1166568:118821311882131188755543Escherichia coli CFT073, complete genomeF1C major fimbrial subunit precursor8e-26116
NC_008253:296500:311279311279311824546Escherichia coli 536, complete genomeS-fimbrial protein subunit precursor6e-26116
NC_015566:1206500:121601212160121216557546Serratia sp. AS12 chromosome, complete genomeFimbrial protein domain-containing protein1e-2099
NC_015567:1206727:121619712161971216742546Serratia sp. AS9 chromosome, complete genomeFimbrial protein domain-containing protein1e-2099
NC_004631:2366335:238447023844702385024555Salmonella enterica subsp. enterica serovar Typhi Ty2, completeType-1 fimbrial protein, a chain precursor7e-1993.6
NC_011147:2247460:226507722650772265634558Salmonella enterica subsp. enterica serovar Paratyphi A strtype-1 fimbrial protein, a chain2e-1789
NC_006511:2251022:226989322698932270450558Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtype-1 fimbrial protein, a chain precursor2e-1789
NC_010102:2495441:251341225134122513969558Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1789
NC_010468:2345781:235332723533272353440114Escherichia coli ATCC 8739, complete genome5e-1684
NC_002655:1966464:197340919734091973612204Escherichia coli O157:H7 EDL933, complete genomehypothetical protein5e-1580.5
NC_016845:2655512:266169226616922662606915Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative ARAC-type regulatory protein2e-1478.6
NC_009648:1882500:188609218860921887006915Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative ARAC-type regulatory protein2e-1478.6
NC_011751:1770376:179158517915851791839255Escherichia coli UMN026 chromosome, complete genomeputative HTH-type transcriptional regulator yqhC (fragment)2e-1478.6
NC_016831:2402893:242025424202542420790537Salmonella enterica subsp. enterica serovar Gallinarum/pullorumtype-1 fimbrial protein, a chain precursor1e-1375.9
NC_012947:3231893:325454332545433255085543Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein3e-1374.3
NC_011415:600375:601722601722602264543Escherichia coli SE11 chromosome, complete genomeputative fimbrial protein3e-1374.3
NC_014258:355845:375318375318376244927Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional Activator RhaS5e-1270.5
NC_003295:659837:672486672486673451966Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN5e-1167
NC_010322:3315024:333232733323273333292966Pseudomonas putida GB-1 chromosome, complete genomeAraC family transcriptional regulator1e-1066.2
NC_016830:4639388:464485146448514645618768Pseudomonas fluorescens F113 chromosome, complete genomearaC family transcriptional regulator1e-1066.2
NC_010067:2881448:290244729024472902989543Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-1063.5
NC_016514:2079975:208980720898072090496690Enterobacter cloacae EcWSU1 chromosome, complete genometype-1 fimbrial protein subunit1e-0962.8
NC_012691:2097287:211617421161742117124951Tolumonas auensis DSM 9187, complete genometranscriptional regulator, AraC family1e-0962.8
NC_016602:2854107:285845628584562858971516Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceP pilus assembly protein3e-0961.6
NC_013892:2108175:214256721425672143490924Xenorhabdus bovienii SS-2004 chromosome, complete genomeAraC family transcriptional regulator4e-0960.8
NC_010694:3178842:319483431948343195373540Erwinia tasmaniensis, complete genomeFimI fimbrial protein, FimI5e-0960.5
NC_016612:5296076:532543353254335325963531Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-0858.9
NC_020409:1173796:119140111914011192339939Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTranscriptional regulator, AraC family3e-0857.8
NC_009792:4017510:403709640370964037623528Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-0857.8
NC_015663:549425:573487573487574068582Enterobacter aerogenes KCTC 2190 chromosome, complete genomemajor subunit of type 1 fimbria5e-0857.4
NC_014306:1286248:129689412968941297490597Erwinia billingiae Eb661, complete genomeFimbrial major subunit1e-0755.8
NC_010512:734834:7382207382207392361017Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, AraC family2e-0755.5
NC_008544:348500:3521083521083531241017Burkholderia cenocepacia HI2424 chromosome 3, complete sequencetranscriptional regulator, AraC family2e-0755.5
NC_008062:370902:3742883742883753041017Burkholderia cenocepacia AU 1054 chromosome 3, complete sequencetranscriptional regulator, AraC family2e-0755.5
NC_007509:1383013:1387020138702013880361017Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, AraC family2e-0755.1
NC_008258:4345400:4350843435084343522581416Shigella flexneri 5 str. 8401, complete genome3e-0754.7
NC_017328:4417000:442339744233974424035639Shigella flexneri 2002017 chromosome, complete genomeFimI fimbrial protein5e-0753.9
NC_004741:4364235:437204843720484372686639Shigella flexneri 2a str. 2457T, complete genomefimbrial protein5e-0753.9
NC_004337:4374500:438095243809524381590639Shigella flexneri 2a str. 301, complete genomefimbrial protein5e-0753.9
NC_008253:4817864:484886748488674849505639Escherichia coli 536, complete genomefimbrin-like protein fimI precursor7e-0753.5
NC_013361:5580741:559224355922435592782540Escherichia coli O26:H11 str. 11368 chromosome, complete genomefimbrial protein FimI7e-0753.5
NC_011283:819970:824471824471824998528Klebsiella pneumoniae 342 chromosome, complete genomefimbrial protein6e-0753.5
NC_007946:4875997:490836849083684909015648Escherichia coli UTI89, complete genomeFimI fimbrial protein8e-0753.1
NC_007613:4403070:441741044174104418048639Shigella boydii Sb227, complete genomefimbrial protein1e-0652.8
NC_010628:675445:690930690930691910981Nostoc punctiforme PCC 73102, complete genometranscriptional regulator, AraC family1e-0652.8
NC_002695:5381576:539851153985115399158648Escherichia coli O157:H7 str. Sakai, complete genomeFimI2e-0652.4
NC_004431:5123325:513845951384595138998540Escherichia coli CFT073, complete genomeFimbrin-like protein fimI precursor2e-0652.4
NC_016002:2825017:284537228453722846346975Pseudogulbenkiania sp. NH8B, complete genomeAraC family transcriptional regulator2e-0652.4
NC_000913:4528278:454175145417514542290540Escherichia coli K12, complete genomefimbrial protein involved in type 1 pilus biosynthesis2e-0652
AC_000091:4534935:454840845484084548947540Escherichia coli W3110 DNA, complete genomefimbrial protein involved in type 1 pilus biosynthesis2e-0652
NC_011750:4978000:499118149911814991720540Escherichia coli IAI39 chromosome, complete genometype 1 pilus biosynthesis fimbrial protein2e-0652
NC_011751:5070597:508308750830875083626540Escherichia coli UMN026 chromosome, complete genometype 1 pilus biosynthesis fimbrial protein2e-0652
NC_008686:95326:101268101268102167900Paracoccus denitrificans PD1222 chromosome 1, complete sequenceAraC-type transcriptional regulator domain protein2e-0652
CP002516:4199133:420616242061624206701540Escherichia coli KO11, complete genomeFimbrial protein domain-containing protein2e-0652
NC_011745:5114500:513000451300045130543540Escherichia coli ED1a chromosome, complete genometype 1 pilus biosynthesis fimbrial protein2e-0652
CU928160:4570498:460437046043704604909540Escherichia coli IAI1 chromosome, complete genomefimbrial protein involved in type 1 pilus biosynthesis2e-0652
NC_011741:4570498:460437046043704604909540Escherichia coli IAI1 chromosome, complete genometype 1 pilus biosynthesis fimbrial protein2e-0652
NC_013941:5219841:523679252367925237439648Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeFimI fimbrial protein2e-0652
NC_013008:5411285:542832854283285428867540Escherichia coli O157:H7 str. TW14359 chromosome, complete genometype 1 pilus biosynthesis fimbrial protein2e-0652
NC_016902:4199133:420616242061624206701540Escherichia coli KO11FL chromosome, complete genomefimbrial protein domain-containing protein2e-0652
NC_012967:4510393:452464245246424525181540Escherichia coli B str. REL606 chromosome, complete genometype 1 pilus biosynthesis fimbrial protein2e-0652
NC_012947:3883484:388892738889273889466540Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completefimbrial protein2e-0652
NC_012759:4467288:448023644802364480775540Escherichia coli BW2952 chromosome, complete genometype 1 pilus biosynthesis fimbrial protein2e-0652
NC_011742:4873351:488655148865514887090540Escherichia coli S88 chromosome, complete genometype 1 pilus biosynthesis fimbrial protein2e-0652
NC_013364:5255700:527387552738755274414540Escherichia coli O111:H- str. 11128, complete genomefimbrial protein FimI2e-0651.6
NC_014307:2735934:274521727452172746131915Ralstonia solanacearum CFBP2957 chromosome, complete genomeAraC family transcriptional regulator2e-0651.6
NC_011353:5455224:547230954723095472806498Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype-1 fimbrial protein-like protein3e-0651.6
NC_010498:4930649:494839349483934948890498Escherichia coli SMS-3-5, complete genometype-1 fimbrial protein3e-0651.6
CP002185:4791811:480621148062114806708498Escherichia coli W, complete genomeputative fimbrial subunit protein3e-0651.6
CP002797:4656327:467173546717354672232498Escherichia coli NA114, complete genomePutative type 1 fimbriae protein FimI3e-0651.6