Pre_GI: BLASTP Hits

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Query: NC_012917:833721:852892 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 852892, End: 853098, Length: 207

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:913553:934497934497934700204Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative tautomerase2e-23107
NC_013421:1038500:104124410412441041474231Pectobacterium wasabiae WPP163, complete genome4-oxalocrotonate tautomerase family enzyme2e-22103
NC_012846:1837924:186429118642911864500210Bartonella grahamii as4aup, complete genome4-oxalocrotonate tautomerase9e-2095.5
NC_020300:1344453:134741113474111347614204Bartonella australis Aust/NH1, complete genome4-oxalocrotonate tautomerase2e-1891.3
NC_014228:4360676:436635443663544366560207Xenorhabdus nematophila ATCC 19061, complete genomeputative tautomerase K23e-1787
NC_009832:2211154:224520822452082245426219Serratia proteamaculans 568, complete genome4-oxalocrotonate tautomerase family enzyme9e-1475.5
NC_010501:2609567:263716626371662637372207Pseudomonas putida W619, complete genome4-oxalocrotonate tautomerase family enzyme3e-1270.5
NC_008229:1149480:115937311593731159579207Helicobacter acinonychis str. Sheeba, complete genomeputative tautomerase2e-0961.6
NC_005363:3562205:356605335660533566253201Bdellovibrio bacteriovorus HD100, complete genomehypothetical protein8e-0855.8
NC_016935:1868839:189543818954381895638201Paenibacillus mucilaginosus 3016 chromosome, complete genometautomerase3e-0753.9
NC_015675:4565500:456826645682664568502237Mesorhizobium opportunistum WSM2075 chromosome, complete genome4-oxalocrotonate tautomerase2e-0651.2