Pre_GI: BLASTP Hits

Some Help

Query: NC_012917:4646491:4655757 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 4655757, End: 4655978, Length: 222

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:2688095:270034827003482700596249Dickeya dadantii 3937 chromosome, complete genomeputative cytoplasmic protein3e-26117
NC_012214:3931824:394029439402943940545252Erwinia pyrifoliae Ep1/96, complete genomeputative addiction module antitoxin, Axe family3e-0857.4