Pre_GI: BLASTP Hits

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Query: NC_012917:4328463:4339465 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 4339465, End: 4340589, Length: 1125

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:4328463:4341250434125043423741125Pectobacterium carotovorum subsp. carotovorum PC1, complete genomePectate lyase/Amb allergen0667
NC_012917:4328463:4342995434299543441191125Pectobacterium carotovorum subsp. carotovorum PC1, complete genomePectate lyase/Amb allergen4e-176617
NC_013592:4295449:4319315431931543204421128Dickeya dadantii Ech586, complete genomePectate lyase/Amb allergen9e-158556
NC_012912:325913:3259133259133270401128Dickeya zeae Ech1591, complete genomePectate lyase/Amb allergen1e-153543
NC_010995:58696:7334473344762322889Cellvibrio japonicus Ueda107, complete genomepectate lyase, putative, pel1D3e-24112
NC_013406:303218:3309993309993330502052Paenibacillus sp. Y412MC10 chromosome, complete genomePectate lyase/Amb allergen2e-1583.6
NC_012778:137064:1463471463471500273681Eubacterium eligens ATCC 27750, complete genomePolysaccharide Lyase Family 1-like pectate lyase2e-1480.5
NC_015690:8614000:8615026861502686204675442Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein3e-1376.3
NC_013406:3521489:3526227352622735285542328Paenibacillus sp. Y412MC10 chromosome, complete genomePectate lyase/Amb allergen1e-1067.8
NC_015732:30472:5871158711601381428Spirochaeta caldaria DSM 7334 chromosome, complete genomePectate lyase/Amb allergen9e-0961.6
NC_013093:5922777:5922777592277759251612385Actinosynnema mirum DSM 43827, complete genomePectinesterase1e-0758.2
NC_010995:58696:8042180421830692649Cellvibrio japonicus Ueda107, complete genomepectate lyase, putative, pel1C1e-0757.8