Pre_GI: BLASTP Hits

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Query: NC_012917:4328463:4332150 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 4332150, End: 4332386, Length: 237

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016513:689689:705769705769705987219Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completephosphopyruvate hydratase6e-1579.7
NC_013416:386301:402376402376402594219Aggregatibacter actinomycetemcomitans D11S-1, complete genomehypothetical protein3e-1477
NC_012913:2189862:219054421905442190762219Aggregatibacter aphrophilus NJ8700, complete genomehypothetical protein8e-1475.9
NC_012108:1067876:109395810939581094200243Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein2e-1167.8
NC_007759:1028977:105416610541661054435270Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein5e-1166.6
NC_008609:142471:180797180797181096300Pelobacter propionicus DSM 2379, complete genomeprotein of unknown function UPF02702e-0754.7