Pre_GI: BLASTP Hits

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Query: NC_012917:3378759:3379749 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3379749, End: 3380522, Length: 774

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:3744705:374569437456943746467774Dickeya dadantii 3937 chromosome, complete genomeputative hydrolases or acyltransferases (alpha/beta hydrolase superfamily)1e-118426
NC_010508:1898547:191270719127071913537831Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencehypothetical protein1e-82306
NC_016609:6750111:679255067925506793341792Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein3e-51201
NC_008314:1955793:196469619646961965562867Ralstonia eutropha H16 chromosome 2, complete sequenceputative extracytoplasmic hydrolase7e-51200
NC_010505:4990472:500954650095465010313768Methylobacterium radiotolerans JCM 2831, complete genomehypothetical protein2e-50199
NC_008800:3061484:308490030849003085592693Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-49196
NC_015379:4249238:427022842702284271001774Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein6e-49194
NC_014307:533975:543572543572544420849Ralstonia solanacearum CFBP2957 chromosome, complete genomehydrolase3e-48191
NC_011757:1532047:153631915363191537098780Methylobacterium chloromethanicum CM4, complete genomehypothetical protein1e-47190
NC_015434:4640769:466529446652944666013720Verrucosispora maris AB-18-032 chromosome, complete genomehydrolase protein9e-47187
NC_010505:4990472:501890650189065019685780Methylobacterium radiotolerans JCM 2831, complete genomehypothetical protein1e-46186
NC_015508:296856:335384335384336145762Agrobacterium sp. H13-3 chromosome linear, complete sequenceputative hydrolase protein5e-46184
NC_003295:2507850:252848825284882529267780Ralstonia solanacearum GMI1000, complete genomePROBABLE SIGNAL PEPTIDE PROTEIN2e-45182
NC_008061:2106848:213450221345022134945444Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencehypothetical protein3e-45181
NC_008543:127675:134826134826135269444Burkholderia cenocepacia HI2424 chromosome 2, complete sequencehypothetical protein3e-45181
NC_010725:4035397:407083040708304071597768Methylobacterium populi BJ001, complete genomehypothetical protein1e-44180
NC_020453:7826358:784891378489137849665753Agromonas oligotrophica S58 DNA, complete genomehypothetical protein5e-41167
NC_014100:2782000:278608527860852786816732Caulobacter segnis ATCC 21756 chromosome, complete genomehypothetical protein7e-41167
NC_020453:7826358:785318478531847853939756Agromonas oligotrophica S58 DNA, complete genomehypothetical protein6e-40164
NC_015957:7408466:742935374293537430231879Streptomyces violaceusniger Tu 4113 chromosome, complete genomealpha/beta hydrolase fold protein3e-39162
NC_007510:943068:956470956470957165696Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein5e-39161
NC_013757:2630000:263496326349632635712750Geodermatophilus obscurus DSM 43160, complete genomehypothetical protein4e-37154
NC_016631:1329702:134553613455361346237702Granulicella mallensis MP5ACTX8 chromosome, complete genomehypothetical protein8e-37154
NC_016582:11920331:119334091193340911934110702Streptomyces bingchenggensis BCW-1 chromosome, complete genomealpha/beta hydrolase fold protein3e-31135
NC_015675:4526500:452671345267134527495783Mesorhizobium opportunistum WSM2075 chromosome, complete genomealpha/beta hydrolase fold protein2e-29129
NC_012988:1777618:180146018014601801936477Methylobacterium extorquens DM4, complete genomehypothetical protein6e-22104
NC_017955:2327500:233612823361282336823696Modestobacter marinus, complete genomeesterase4e-1788.6
NC_009921:5508000:551022155102215510922702Frankia sp. EAN1pec, complete genomeconserved hypothetical protein6e-1374.7
NC_006576:2423250:244564324456432446359717Synechococcus elongatus PCC 6301, complete genomehypothetical protein1e-1170.5
NC_016609:2150863:216035521603552161188834Niastella koreensis GR20-10 chromosome, complete genomealpha/beta hydrolase fold protein3e-1169.3
NC_008752:166877:168874168874169602729Acidovorax avenae subsp. citrulli AAC00-1, complete genomealpha/beta hydrolase fold4e-1168.6
NC_015138:201323:205283205283206011729Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completealpha/beta hydrolase fold protein1e-1067
NC_014963:2759978:276738227673822768092711Terriglobus saanensis SP1PR4 chromosome, complete genomehydrolase or acyltransferase of alpha/beta superfamily2e-0963.2
NC_016631:3245501:325545232554523256159708Granulicella mallensis MP5ACTX8 chromosome, complete genomehypothetical protein6e-0858.2
NC_016948:2931285:297671929767192977465747Mycobacterium intracellulare MOTT-64 chromosome, complete genomealpha/beta hydrolase protein3e-0755.8
NC_009921:5371483:538190953819095382646738Frankia sp. EAN1pec, complete genomeputative esterase4e-0755.5
NC_015566:2957956:296734729673472967565219Serratia sp. AS12 chromosome, complete genome5e-0755.1
NC_015434:2683631:269178726917872692431645Verrucosispora maris AB-18-032 chromosome, complete genomealpha/beta hydrolase6e-0754.7