Pre_GI: BLASTP Hits

Some Help

Query: NC_012917:3378759:3378759 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3378759, End: 3379067, Length: 309

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:3744705:374470537447053745013309Dickeya dadantii 3937 chromosome, complete genomehypothetical protein4e-37152
NC_008543:127675:133809133809134117309Burkholderia cenocepacia HI2424 chromosome 2, complete sequencehypothetical protein2e-1891.3
NC_008061:2106848:213565421356542135962309Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencehypothetical protein2e-1891.3
NC_011283:785973:806775806775807068294Klebsiella pneumoniae 342 chromosome, complete genomeYciL domain-containing protein1e-0858.5
NC_013508:2870954:288828628882862888582297Edwardsiella tarda EIB202, complete genomehypothetical protein6e-0752.8
NC_016514:2713834:273279727327972733090294Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein8e-0752.4
NC_012796:2683711:269786826978682698155288Desulfovibrio magneticus RS-1, complete genomehypothetical protein1e-0652
NC_014958:1268559:128658812865881286893306Deinococcus maricopensis DSM 21211 chromosome, complete genomeYCII-like protein2e-0651.2
NC_020211:2012480:201594720159472016231285Serratia marcescens WW4, complete genomeYCII-like protein2e-0651.2
NC_014121:1589389:160875716087571609050294Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-0650.8
NC_011274:1094379:111098211109821111287306Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein8e-0648.9
NC_011294:1085447:110206911020691102362294Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein9e-0648.9