Pre_GI: BLASTP Hits

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Query: NC_012917:3241196:3283432 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3283432, End: 3283653, Length: 222

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:3744705:374778437477843748005222Dickeya dadantii 3937 chromosome, complete genomeD-alanine carrier protein DltC3e-33140
NC_010645:3239420:325747432574743257710237Bordetella avium 197N, complete genomeacyl carrier protein3e-0650.4