Pre_GI: BLASTP Hits

Some Help

Query: NC_012917:3241196:3275533 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3275533, End: 3276789, Length: 1257

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007626:68925:7611176111771751065Magnetospirillum magneticum AMB-1, complete genomePredicted Fe-S oxidoreductase5e-1582.4
NC_012881:964823:9742439742439753161074Desulfovibrio salexigens DSM 2638, complete genomeRadical SAM domain protein3e-1376.6
NC_012881:964823:9753339753339763821050Desulfovibrio salexigens DSM 2638, complete genomeRadical SAM domain protein9e-1271.6
NC_014844:2158318:2171174217117421722441071Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein1e-0964.3
NC_008820:91967:1019151019151030361122Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein5e-0962.4
NC_018645:4104302:4111919411191941129861068Desulfobacula toluolica Tol2, complete genomeoxidoreductase5e-0859.3