Pre_GI: BLASTP Hits

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Query: NC_012917:3198000:3214498 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 3214498, End: 3214764, Length: 267

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:1545386:155119715511971551463267Pectobacterium wasabiae WPP163, complete genomehypothetical protein5e-42169
NC_014306:3006028:300695430069543007226273Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein5e-27119
NC_014562:1883517:188443918844391884714276Pantoea vagans C9-1 chromosome, complete genomehypothetical protein7e-24109