Pre_GI: BLASTP Hits

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Query: NC_012917:2921932:2929271 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2929271, End: 2930692, Length: 1422

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:3023762:3036374303637430378071434Dickeya dadantii 3937 chromosome, complete genomehypothetical protein6e-147521
NC_013592:1730505:1747320174732017487471428Dickeya dadantii Ech586, complete genomehypothetical protein8e-142504
NC_012912:1788308:1804788180478818062211434Dickeya zeae Ech1591, complete genomehypothetical protein5e-132471
NC_016514:2950860:2968763296876329701571395Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein3e-96352
NC_014121:1357339:1376477137647713778951419Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-90332