Pre_GI: BLASTP Hits

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Query: NC_012917:2641000:2653078 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2653078, End: 2654865, Length: 1788

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015690:1186545:1237266123726612383001035Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein4e-38159
NC_009952:1984955:2002691200269120044211731Dinoroseobacter shibae DFL 12, complete genomehypothetical protein3e-23110
NC_008209:2367500:236832323683232369162840Roseobacter denitrificans OCh 114, complete genomehypothetical protein4e-23110
NC_007802:1991211:199931319993132000149837Jannaschia sp. CCS1, complete genomehypothetical protein2e-22107
NC_003911:2899435:289943528994352900271837Silicibacter pomeroyi DSS-3, complete genomehypothetical protein8e-22105
NC_009050:567209:5829345829345839411008Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencehypothetical protein8e-21102
NC_016861:22256:3809738097392331137Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-20101
NC_007494:1:717271728008837Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencehypothetical protein2e-20100
NC_008686:2080770:208318520831852084021837Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein9e-2099
NC_012489:4336790:436408443640844364935852Gemmatimonas aurantiaca T-27, complete genomehypothetical protein3e-1894
NC_012791:4794362:4816362481636248175041143Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein9e-1892.4
NC_008435:2658986:274394627439462744797852Rhodopseudomonas palustris BisA53, complete genomehypothetical protein1e-1792
NC_017506:1660072:1674490167449016759801491Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein3e-1790.9
NC_007164:1434305:1448452144845214497231272Corynebacterium jeikeium K411, complete genomehypothetical protein5e-1789.7
NC_013132:3959258:3977420397742039789161497Chitinophaga pinensis DSM 2588, complete genomehypothetical protein2e-1584.7
NC_007356:1165760:117592911759291176696768Dehalococcoides sp. CBDB1, complete genomehypothetical protein4e-1583.6
NC_014614:2643203:2645614264561426468251212Clostridium sticklandii, complete genomehypothetical protein1e-1378.6
NC_008571:938835:1008388100838810096111224Gramella forsetii KT0803, complete genomehypothetical protein1e-1275.5
NC_010338:1216385:123894312389431239851909Caulobacter sp. K31, complete genomehypothetical protein2e-1067.8
NC_015677:1:1220712207150232817Ramlibacter tataouinensis TTB310 chromosome, complete genome5-methylcytosine-specific restriction enzyme B4e-1067
NC_011751:3048490:3066453306645330677061254Escherichia coli UMN026 chromosome, complete genomehypothetical protein6e-0653.1
NC_010172:480000:508251508251508562312Methylobacterium extorquens PA1, complete genomehypothetical protein7e-0652.8
NC_016863:2844883:2860887286088728620891203Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative hexulose 6 phosphate synthase1e-0552.4
NC_016856:2896630:2912634291263429138361203Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative hexulose 6 phosphate synthase1e-0552.4
NC_017046:2896651:2913716291371629149181203Salmonella enterica subsp. enterica serovar Typhimurium str. 798hexulose 6 phosphate synthase1e-0552.4
NC_016857:2871689:2914975291497529161771203Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative hexulose 6 phosphate synthase1e-0552.4
NC_016810:2871689:2914975291497529161771203Salmonella enterica subsp. enterica serovar Typhimurium strputative hexulose 6 phosphate synthase1e-0552.4
NC_011083:2847318:2866915286691528681171203Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative hexulose 6 phosphate synthase1e-0552.4